Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdx1P52946 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pdx1P52946 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pdx1P52946 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdx1P52946 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdx1P52946 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pdx1P52946 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdx1P52946 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Pdx1P52946 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Pdx1P52946 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdx1P52946 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Pdx1P52946 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdx1P52946 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdx1P52946 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdx1P52946 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdx1P52946 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdx1P52946 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdx1P52946 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.67□□□□□ -0.22
Pdx1P52946 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
Pdx1P52946 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.67□□□□□ -0.22
Pdx1P52946 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pdx1P52946 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdx1P52946 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Pdx1P52946 Gm21854-201ENSMUST00000179901 471 ntBASIC13.67□□□□□ -0.22
Pdx1P52946 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.67□□□□□ -0.22
Pdx1P52946 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdx1P52946 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.67□□□□□ -0.22
Pdx1P52946 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdx1P52946 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Pdx1P52946 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pdx1P52946 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdx1P52946 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.67□□□□□ -0.22
Pdx1P52946 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdx1P52946 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdx1P52946 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdx1P52946 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdx1P52946 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdx1P52946 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdx1P52946 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pdx1P52946 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdx1P52946 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdx1P52946 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdx1P52946 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pdx1P52946 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdx1P52946 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Pdx1P52946 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pdx1P52946 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pdx1P52946 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdx1P52946 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pdx1P52946 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pdx1P52946 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdx1P52946 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pdx1P52946 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pdx1P52946 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdx1P52946 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdx1P52946 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pdx1P52946 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdx1P52946 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.66□□□□□ -0.22
Pdx1P52946 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pdx1P52946 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdx1P52946 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdx1P52946 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdx1P52946 Gm6912-201ENSMUST00000117218 544 ntBASIC13.66□□□□□ -0.22
Pdx1P52946 Gm15240-201ENSMUST00000118156 720 ntBASIC13.66□□□□□ -0.22
Pdx1P52946 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pdx1P52946 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Pdx1P52946 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.66□□□□□ -0.22
Pdx1P52946 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pdx1P52946 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.66□□□□□ -0.22
Pdx1P52946 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdx1P52946 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdx1P52946 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.66□□□□□ -0.22
Pdx1P52946 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Pdx1P52946 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Pdx1P52946 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdx1P52946 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdx1P52946 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdx1P52946 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdx1P52946 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdx1P52946 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdx1P52946 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
Pdx1P52946 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdx1P52946 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdx1P52946 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pdx1P52946 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdx1P52946 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pdx1P52946 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pdx1P52946 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Pdx1P52946 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pdx1P52946 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pdx1P52946 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdx1P52946 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdx1P52946 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdx1P52946 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdx1P52946 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pdx1P52946 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdx1P52946 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdx1P52946 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pdx1P52946 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pdx1P52946 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms