Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx2P48379 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx2P48379 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx2P48379 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx2P48379 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx2P48379 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx2P48379 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx2P48379 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx2P48379 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Rfx2P48379 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx2P48379 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Rfx2P48379 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx2P48379 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.49□□□□□ -0.09
Rfx2P48379 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.49□□□□□ -0.09
Rfx2P48379 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.49□□□□□ -0.09
Rfx2P48379 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Rfx2P48379 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Rfx2P48379 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.49□□□□□ -0.09
Rfx2P48379 Gm18624-201ENSMUST00000220966 658 ntBASIC14.49□□□□□ -0.09
Rfx2P48379 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.49□□□□□ -0.09
Rfx2P48379 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx2P48379 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx2P48379 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx2P48379 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.49□□□□□ -0.09
Rfx2P48379 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.49□□□□□ -0.09
Rfx2P48379 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx2P48379 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx2P48379 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx2P48379 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx2P48379 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx2P48379 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx2P48379 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx2P48379 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx2P48379 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx2P48379 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx2P48379 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx2P48379 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx2P48379 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx2P48379 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx2P48379 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx2P48379 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx2P48379 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx2P48379 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.48□□□□□ -0.09
Rfx2P48379 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx2P48379 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx2P48379 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
Rfx2P48379 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx2P48379 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.48□□□□□ -0.09
Rfx2P48379 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.48□□□□□ -0.09
Rfx2P48379 Gm5354-201ENSMUST00000182417 973 ntBASIC14.48□□□□□ -0.09
Rfx2P48379 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Rfx2P48379 Mir6392-201ENSMUST00000184924 108 ntBASIC14.48□□□□□ -0.09
Rfx2P48379 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx2P48379 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.48□□□□□ -0.09
Rfx2P48379 Gm45384-201ENSMUST00000210451 277 ntBASIC14.48□□□□□ -0.09
Rfx2P48379 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.48□□□□□ -0.09
Rfx2P48379 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.48□□□□□ -0.09
Rfx2P48379 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.48□□□□□ -0.09
Rfx2P48379 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx2P48379 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx2P48379 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Rfx2P48379 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Rfx2P48379 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx2P48379 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx2P48379 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx2P48379 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx2P48379 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx2P48379 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx2P48379 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx2P48379 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx2P48379 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx2P48379 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Rfx2P48379 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx2P48379 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx2P48379 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx2P48379 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx2P48379 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx2P48379 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Rfx2P48379 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Rfx2P48379 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx2P48379 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx2P48379 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.47□□□□□ -0.09
Rfx2P48379 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx2P48379 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Rfx2P48379 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Rfx2P48379 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx2P48379 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx2P48379 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx2P48379 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx2P48379 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Rfx2P48379 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx2P48379 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx2P48379 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.47□□□□□ -0.09
Rfx2P48379 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx2P48379 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx2P48379 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx2P48379 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx2P48379 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.47□□□□□ -0.09
Rfx2P48379 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx2P48379 Gm18187-201ENSMUST00000196476 984 ntBASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms