Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Gm9182-201ENSMUST00000217829 639 ntBASIC11.52□□□□□ -0.56
Abca1P41233 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Abca1P41233 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Abca1P41233 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Abca1P41233 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Abca1P41233 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.52□□□□□ -0.57
Abca1P41233 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Abca1P41233 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Abca1P41233 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Abca1P41233 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.52□□□□□ -0.57
Abca1P41233 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Abca1P41233 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Abca1P41233 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Abca1P41233 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Abca1P41233 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.52□□□□□ -0.57
Abca1P41233 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Abca1P41233 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Abca1P41233 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Abca1P41233 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Abca1P41233 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Abca1P41233 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Abca1P41233 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Abca1P41233 Gm15393-201ENSMUST00000120499 219 ntBASIC11.52□□□□□ -0.57
Abca1P41233 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Abca1P41233 Gm42693-201ENSMUST00000196779 631 ntBASIC11.52□□□□□ -0.57
Abca1P41233 Gm18307-201ENSMUST00000206864 949 ntBASIC11.52□□□□□ -0.57
Abca1P41233 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.52□□□□□ -0.57
Abca1P41233 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Abca1P41233 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Abca1P41233 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Abca1P41233 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Abca1P41233 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Abca1P41233 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Abca1P41233 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.51□□□□□ -0.57
Abca1P41233 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Abca1P41233 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Abca1P41233 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Abca1P41233 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Abca1P41233 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Abca1P41233 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Abca1P41233 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Abca1P41233 Gm17794-201ENSMUST00000220252 955 ntBASIC11.51□□□□□ -0.57
Abca1P41233 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Abca1P41233 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Abca1P41233 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Abca1P41233 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Abca1P41233 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.51□□□□□ -0.57
Abca1P41233 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Abca1P41233 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Abca1P41233 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Abca1P41233 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Abca1P41233 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Abca1P41233 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Abca1P41233 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.51□□□□□ -0.57
Abca1P41233 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.51□□□□□ -0.57
Abca1P41233 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Abca1P41233 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Abca1P41233 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Abca1P41233 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Abca1P41233 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Abca1P41233 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Abca1P41233 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Abca1P41233 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Abca1P41233 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Abca1P41233 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.51□□□□□ -0.57
Abca1P41233 Gm6916-202ENSMUST00000205523 195 ntBASIC11.51□□□□□ -0.57
Abca1P41233 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Abca1P41233 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Abca1P41233 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Abca1P41233 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Abca1P41233 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Abca1P41233 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Abca1P41233 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Abca1P41233 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.5□□□□□ -0.57
Abca1P41233 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Abca1P41233 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Abca1P41233 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Abca1P41233 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Abca1P41233 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Abca1P41233 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Abca1P41233 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Abca1P41233 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Abca1P41233 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Abca1P41233 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Abca1P41233 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Abca1P41233 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Abca1P41233 Gm13392-201ENSMUST00000117708 150 ntBASIC11.5□□□□□ -0.57
Abca1P41233 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.5□□□□□ -0.57
Abca1P41233 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.5□□□□□ -0.57
Abca1P41233 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.5□□□□□ -0.57
Abca1P41233 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Abca1P41233 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.5□□□□□ -0.57
Abca1P41233 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.5□□□□□ -0.57
Abca1P41233 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Abca1P41233 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Abca1P41233 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Abca1P41233 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Abca1P41233 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Abca1P41233 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Abca1P41233 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms