Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx1P18111 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Cdx1P18111 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx1P18111 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
Cdx1P18111 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx1P18111 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx1P18111 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cdx1P18111 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx1P18111 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx1P18111 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx1P18111 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx1P18111 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx1P18111 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdx1P18111 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdx1P18111 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdx1P18111 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Cdx1P18111 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Cdx1P18111 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Cdx1P18111 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdx1P18111 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdx1P18111 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.19□□□□□ -0.62
Cdx1P18111 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdx1P18111 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.19□□□□□ -0.62
Cdx1P18111 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Cdx1P18111 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cdx1P18111 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdx1P18111 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cdx1P18111 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdx1P18111 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.19□□□□□ -0.62
Cdx1P18111 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cdx1P18111 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Cdx1P18111 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Cdx1P18111 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.19□□□□□ -0.62
Cdx1P18111 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.19□□□□□ -0.62
Cdx1P18111 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC11.19□□□□□ -0.62
Cdx1P18111 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdx1P18111 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdx1P18111 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdx1P18111 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdx1P18111 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdx1P18111 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.19□□□□□ -0.62
Cdx1P18111 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.19□□□□□ -0.62
Cdx1P18111 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdx1P18111 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Cdx1P18111 Gm13337-201ENSMUST00000119183 1594 ntBASIC11.19□□□□□ -0.62
Cdx1P18111 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cdx1P18111 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Cdx1P18111 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cdx1P18111 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdx1P18111 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cdx1P18111 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdx1P18111 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdx1P18111 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.19□□□□□ -0.62
Cdx1P18111 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdx1P18111 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx1P18111 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx1P18111 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx1P18111 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx1P18111 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx1P18111 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx1P18111 Gm5366-201ENSMUST00000215494 1338 ntBASIC11.18□□□□□ -0.62
Cdx1P18111 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx1P18111 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Cdx1P18111 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx1P18111 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.18□□□□□ -0.62
Cdx1P18111 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx1P18111 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx1P18111 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Cdx1P18111 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC11.18□□□□□ -0.62
Cdx1P18111 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Cdx1P18111 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx1P18111 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx1P18111 Mir7036b-201ENSMUST00000184791 63 ntBASIC11.18□□□□□ -0.62
Cdx1P18111 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC11.18□□□□□ -0.62
Cdx1P18111 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Cdx1P18111 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx1P18111 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx1P18111 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx1P18111 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx1P18111 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Cdx1P18111 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx1P18111 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx1P18111 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx1P18111 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx1P18111 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Cdx1P18111 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.18□□□□□ -0.62
Cdx1P18111 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.18□□□□□ -0.62
Cdx1P18111 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.18□□□□□ -0.62
Cdx1P18111 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx1P18111 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Cdx1P18111 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx1P18111 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx1P18111 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx1P18111 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cdx1P18111 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx1P18111 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.17□□□□□ -0.62
Cdx1P18111 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx1P18111 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx1P18111 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cdx1P18111 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms