Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TOP1P11387 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TOP1P11387 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TOP1P11387 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TOP1P11387 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.74■□□□□ 0.75
TOP1P11387 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TOP1P11387 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.74■□□□□ 0.75
TOP1P11387 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.74■□□□□ 0.75
TOP1P11387 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
TOP1P11387 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.74■□□□□ 0.75
TOP1P11387 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.74■□□□□ 0.75
TOP1P11387 MIR4469-201ENST00000583919 79 ntBASIC19.74■□□□□ 0.75
TOP1P11387 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.74■□□□□ 0.75
TOP1P11387 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.74■□□□□ 0.75
TOP1P11387 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.74■□□□□ 0.75
TOP1P11387 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TOP1P11387 TUBB8P12-201ENST00000308911 1335 ntBASIC19.74■□□□□ 0.75
TOP1P11387 TUBB7P-202ENST00000428444 1305 ntBASIC19.74■□□□□ 0.75
TOP1P11387 TUBB8P7-204ENST00000567960 1332 ntBASIC19.74■□□□□ 0.75
TOP1P11387 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TOP1P11387 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TOP1P11387 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TOP1P11387 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TOP1P11387 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TOP1P11387 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TOP1P11387 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TOP1P11387 ELL2P1-201ENST00000413990 1906 ntBASIC19.73■□□□□ 0.75
TOP1P11387 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TOP1P11387 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.73■□□□□ 0.75
TOP1P11387 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TOP1P11387 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.73■□□□□ 0.75
TOP1P11387 AC211486.1-202ENST00000416371 468 ntBASIC19.73■□□□□ 0.75
TOP1P11387 AC140658.5-201ENST00000438532 169 ntBASIC19.73■□□□□ 0.75
TOP1P11387 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
TOP1P11387 AC004967.1-201ENST00000453589 447 ntBASIC19.73■□□□□ 0.75
TOP1P11387 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
TOP1P11387 AC211476.1-201ENST00000503899 468 ntBASIC19.73■□□□□ 0.75
TOP1P11387 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.73■□□□□ 0.75
TOP1P11387 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.73■□□□□ 0.75
TOP1P11387 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.73■□□□□ 0.75
TOP1P11387 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.73■□□□□ 0.75
TOP1P11387 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.73■□□□□ 0.75
TOP1P11387 AC134684.3-201ENST00000641758 218 ntBASIC19.73■□□□□ 0.75
TOP1P11387 AC092902.6-201ENST00000641783 218 ntBASIC19.73■□□□□ 0.75
TOP1P11387 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.73■□□□□ 0.75
TOP1P11387 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TOP1P11387 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TOP1P11387 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TOP1P11387 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TOP1P11387 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TOP1P11387 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
TOP1P11387 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.72■□□□□ 0.75
TOP1P11387 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
TOP1P11387 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
TOP1P11387 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TOP1P11387 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TOP1P11387 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.72■□□□□ 0.75
TOP1P11387 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TOP1P11387 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.72■□□□□ 0.75
TOP1P11387 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TOP1P11387 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TOP1P11387 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.72■□□□□ 0.75
TOP1P11387 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.72■□□□□ 0.75
TOP1P11387 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.72■□□□□ 0.75
TOP1P11387 ACTG1P14-201ENST00000446382 1122 ntBASIC19.72■□□□□ 0.75
TOP1P11387 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.72■□□□□ 0.75
TOP1P11387 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.72■□□□□ 0.75
TOP1P11387 AC087641.1-201ENST00000557561 1021 ntBASIC19.72■□□□□ 0.75
TOP1P11387 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
TOP1P11387 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.72■□□□□ 0.75
TOP1P11387 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
TOP1P11387 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.72■□□□□ 0.75
TOP1P11387 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TOP1P11387 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
TOP1P11387 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TOP1P11387 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TOP1P11387 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.72■□□□□ 0.75
TOP1P11387 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
TOP1P11387 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.72■□□□□ 0.75
TOP1P11387 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TOP1P11387 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TOP1P11387 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TOP1P11387 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TOP1P11387 AC092068.3-201ENST00000587894 2016 ntBASIC19.71■□□□□ 0.75
TOP1P11387 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.71■□□□□ 0.75
TOP1P11387 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TOP1P11387 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.71■□□□□ 0.75
TOP1P11387 AC131009.4-201ENST00000624048 1740 ntBASIC19.71■□□□□ 0.75
TOP1P11387 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TOP1P11387 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TOP1P11387 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TOP1P11387 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TOP1P11387 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TOP1P11387 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TOP1P11387 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.71■□□□□ 0.75
TOP1P11387 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.71■□□□□ 0.75
TOP1P11387 AC112191.1-201ENST00000523689 701 ntBASIC19.71■□□□□ 0.75
TOP1P11387 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.71■□□□□ 0.75
TOP1P11387 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TOP1P11387 MIR4492-201ENST00000581627 80 ntBASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms