Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.6□□□□□ -0.07
Hoxc8P09025 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxc8P09025 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxc8P09025 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxc8P09025 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxc8P09025 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.6□□□□□ -0.07
Hoxc8P09025 Gm6447-201ENSMUST00000118905 835 ntBASIC14.6□□□□□ -0.07
Hoxc8P09025 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxc8P09025 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxc8P09025 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.6□□□□□ -0.07
Hoxc8P09025 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxc8P09025 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.6□□□□□ -0.07
Hoxc8P09025 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxc8P09025 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Hoxc8P09025 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxc8P09025 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hoxc8P09025 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Hoxc8P09025 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hoxc8P09025 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hoxc8P09025 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hoxc8P09025 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Hoxc8P09025 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hoxc8P09025 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hoxc8P09025 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hoxc8P09025 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hoxc8P09025 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hoxc8P09025 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hoxc8P09025 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hoxc8P09025 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hoxc8P09025 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hoxc8P09025 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.59□□□□□ -0.07
Hoxc8P09025 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14.59□□□□□ -0.07
Hoxc8P09025 Gm3961-201ENSMUST00000204425 994 ntBASIC14.59□□□□□ -0.07
Hoxc8P09025 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC14.59□□□□□ -0.07
Hoxc8P09025 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.59□□□□□ -0.07
Hoxc8P09025 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.59□□□□□ -0.07
Hoxc8P09025 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.59□□□□□ -0.07
Hoxc8P09025 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hoxc8P09025 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Hoxc8P09025 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hoxc8P09025 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Hoxc8P09025 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hoxc8P09025 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hoxc8P09025 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Hoxc8P09025 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Hoxc8P09025 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hoxc8P09025 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.59□□□□□ -0.07
Hoxc8P09025 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Hoxc8P09025 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.58□□□□□ -0.07
Hoxc8P09025 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Hoxc8P09025 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Hoxc8P09025 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Hoxc8P09025 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
Hoxc8P09025 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Hoxc8P09025 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc8P09025 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc8P09025 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc8P09025 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc8P09025 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc8P09025 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc8P09025 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc8P09025 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc8P09025 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc8P09025 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc8P09025 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc8P09025 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc8P09025 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.58□□□□□ -0.08
Hoxc8P09025 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.58□□□□□ -0.08
Hoxc8P09025 Gm27516-201ENSMUST00000184237 98 ntBASIC14.58□□□□□ -0.08
Hoxc8P09025 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc8P09025 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc8P09025 Gm42627-201ENSMUST00000197347 224 ntBASIC14.58□□□□□ -0.08
Hoxc8P09025 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.58□□□□□ -0.08
Hoxc8P09025 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc8P09025 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.58□□□□□ -0.08
Hoxc8P09025 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.58□□□□□ -0.08
Hoxc8P09025 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Hoxc8P09025 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Hoxc8P09025 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc8P09025 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc8P09025 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc8P09025 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc8P09025 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc8P09025 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc8P09025 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc8P09025 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc8P09025 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Hoxc8P09025 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc8P09025 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc8P09025 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc8P09025 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc8P09025 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hoxc8P09025 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc8P09025 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Hoxc8P09025 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc8P09025 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Hoxc8P09025 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc8P09025 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc8P09025 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxc8P09025 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms