Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hcn1O88704 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcn1O88704 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcn1O88704 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcn1O88704 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcn1O88704 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.29□□□□□ -0.28
Hcn1O88704 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hcn1O88704 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hcn1O88704 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcn1O88704 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hcn1O88704 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcn1O88704 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hcn1O88704 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Hcn1O88704 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hcn1O88704 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hcn1O88704 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hcn1O88704 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hcn1O88704 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Hcn1O88704 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hcn1O88704 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Hcn1O88704 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Hcn1O88704 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hcn1O88704 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hcn1O88704 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hcn1O88704 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hcn1O88704 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.28□□□□□ -0.28
Hcn1O88704 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.28□□□□□ -0.28
Hcn1O88704 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hcn1O88704 Gm38294-201ENSMUST00000192831 381 ntBASIC13.28□□□□□ -0.28
Hcn1O88704 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Hcn1O88704 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Hcn1O88704 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hcn1O88704 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hcn1O88704 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hcn1O88704 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hcn1O88704 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hcn1O88704 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hcn1O88704 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hcn1O88704 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hcn1O88704 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
Hcn1O88704 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hcn1O88704 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hcn1O88704 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Hcn1O88704 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hcn1O88704 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hcn1O88704 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hcn1O88704 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hcn1O88704 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hcn1O88704 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hcn1O88704 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hcn1O88704 Gm13223-201ENSMUST00000118609 747 ntBASIC13.27□□□□□ -0.29
Hcn1O88704 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Hcn1O88704 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hcn1O88704 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hcn1O88704 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.27□□□□□ -0.29
Hcn1O88704 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Hcn1O88704 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hcn1O88704 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hcn1O88704 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.27□□□□□ -0.29
Hcn1O88704 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hcn1O88704 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.27□□□□□ -0.29
Hcn1O88704 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hcn1O88704 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.27□□□□□ -0.29
Hcn1O88704 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hcn1O88704 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.27□□□□□ -0.29
Hcn1O88704 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hcn1O88704 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hcn1O88704 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hcn1O88704 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hcn1O88704 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hcn1O88704 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hcn1O88704 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hcn1O88704 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hcn1O88704 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hcn1O88704 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hcn1O88704 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hcn1O88704 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hcn1O88704 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Hcn1O88704 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hcn1O88704 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hcn1O88704 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hcn1O88704 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hcn1O88704 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hcn1O88704 Gm10275-202ENSMUST00000168697 495 ntBASIC13.26□□□□□ -0.29
Hcn1O88704 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Hcn1O88704 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Hcn1O88704 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hcn1O88704 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.26□□□□□ -0.29
Hcn1O88704 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.26□□□□□ -0.29
Hcn1O88704 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.26□□□□□ -0.29
Hcn1O88704 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hcn1O88704 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.26□□□□□ -0.29
Hcn1O88704 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.26□□□□□ -0.29
Hcn1O88704 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hcn1O88704 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hcn1O88704 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hcn1O88704 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hcn1O88704 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hcn1O88704 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hcn1O88704 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms