Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim55G3X8Y1 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim55G3X8Y1 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim55G3X8Y1 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.18□□□□□ -0.14
Trim55G3X8Y1 AC153937.1-201ENSMUST00000218734 412 ntBASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Gm45011-201ENSMUST00000207620 2297 ntBASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim55G3X8Y1 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Matn2-203ENSMUST00000226766 3252 ntBASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim55G3X8Y1 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim55G3X8Y1 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim55G3X8Y1 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim55G3X8Y1 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim55G3X8Y1 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim55G3X8Y1 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim55G3X8Y1 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim55G3X8Y1 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim55G3X8Y1 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim55G3X8Y1 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim55G3X8Y1 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim55G3X8Y1 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.16□□□□□ -0.14
Trim55G3X8Y1 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim55G3X8Y1 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim55G3X8Y1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim55G3X8Y1 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim55G3X8Y1 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms