Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Gm5366-201ENSMUST00000215494 1338 ntBASIC10.79□□□□□ -0.68
CcsQ9WU84 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
CcsQ9WU84 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CcsQ9WU84 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CcsQ9WU84 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CcsQ9WU84 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CcsQ9WU84 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CcsQ9WU84 Gm14371-201ENSMUST00000138925 1518 ntBASIC10.79□□□□□ -0.68
CcsQ9WU84 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
CcsQ9WU84 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC10.79□□□□□ -0.68
CcsQ9WU84 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
CcsQ9WU84 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 Best4-ps-201ENSMUST00000129783 1380 ntBASIC10.78□□□□□ -0.68
CcsQ9WU84 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 AC126250.1-201ENSMUST00000228343 1768 ntBASIC10.78□□□□□ -0.68
CcsQ9WU84 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 Gm8242-201ENSMUST00000193029 1420 ntBASIC10.78□□□□□ -0.68
CcsQ9WU84 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
CcsQ9WU84 Gm9279-201ENSMUST00000223175 1606 ntBASIC10.78□□□□□ -0.68
CcsQ9WU84 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC10.78□□□□□ -0.68
CcsQ9WU84 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 Gm14494-201ENSMUST00000118786 435 ntBASIC10.78□□□□□ -0.68
CcsQ9WU84 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC10.78□□□□□ -0.68
CcsQ9WU84 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC10.78□□□□□ -0.68
CcsQ9WU84 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC10.78□□□□□ -0.68
CcsQ9WU84 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC10.78□□□□□ -0.68
CcsQ9WU84 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC10.78□□□□□ -0.68
CcsQ9WU84 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 Gm2213-201ENSMUST00000197485 688 ntBASIC10.78□□□□□ -0.68
CcsQ9WU84 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC10.78□□□□□ -0.68
CcsQ9WU84 AC160980.1-201ENSMUST00000224136 970 ntBASIC10.78□□□□□ -0.68
CcsQ9WU84 AC147366.1-201ENSMUST00000227671 852 ntBASIC10.78□□□□□ -0.68
CcsQ9WU84 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
CcsQ9WU84 AC155298.2-201ENSMUST00000225485 6226 ntBASIC10.78□□□□□ -0.68
CcsQ9WU84 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
CcsQ9WU84 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC10.78□□□□□ -0.68
CcsQ9WU84 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.78□□□□□ -0.68
CcsQ9WU84 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
CcsQ9WU84 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CcsQ9WU84 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.68
CcsQ9WU84 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
CcsQ9WU84 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.68
CcsQ9WU84 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
CcsQ9WU84 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
CcsQ9WU84 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
CcsQ9WU84 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
CcsQ9WU84 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
CcsQ9WU84 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CcsQ9WU84 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CcsQ9WU84 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CcsQ9WU84 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CcsQ9WU84 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CcsQ9WU84 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
CcsQ9WU84 Gm9924-202ENSMUST00000192760 2311 ntBASIC10.77□□□□□ -0.69
CcsQ9WU84 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
CcsQ9WU84 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CcsQ9WU84 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC10.77□□□□□ -0.69
CcsQ9WU84 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CcsQ9WU84 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC10.77□□□□□ -0.69
CcsQ9WU84 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CcsQ9WU84 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CcsQ9WU84 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC10.77□□□□□ -0.69
CcsQ9WU84 Gm27300-201ENSMUST00000184085 97 ntBASIC10.77□□□□□ -0.69
CcsQ9WU84 Gm27335-201ENSMUST00000184758 97 ntBASIC10.77□□□□□ -0.69
CcsQ9WU84 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CcsQ9WU84 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CcsQ9WU84 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CcsQ9WU84 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
CcsQ9WU84 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CcsQ9WU84 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC10.77□□□□□ -0.69
CcsQ9WU84 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
CcsQ9WU84 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC10.77□□□□□ -0.69
CcsQ9WU84 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms