Protein–RNA interactions for Protein: Q9D0Z3

Tmem53, Transmembrane protein 53, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem53Q9D0Z3 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tmem53Q9D0Z3 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tmem53Q9D0Z3 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.38□□□□□ -0.27
Tmem53Q9D0Z3 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tmem53Q9D0Z3 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.38□□□□□ -0.27
Tmem53Q9D0Z3 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tmem53Q9D0Z3 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tmem53Q9D0Z3 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tmem53Q9D0Z3 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Gm13823-201ENSMUST00000119930 345 ntBASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Gm6888-201ENSMUST00000221983 706 ntBASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tmem53Q9D0Z3 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Gm25144-201ENSMUST00000179561 110 ntBASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Gm25352-201ENSMUST00000179815 110 ntBASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Gm28630-201ENSMUST00000187806 498 ntBASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tmem53Q9D0Z3 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tmem53Q9D0Z3 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tmem53Q9D0Z3 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Tmem53Q9D0Z3 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.35□□□□□ -0.27
Tmem53Q9D0Z3 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tmem53Q9D0Z3 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tmem53Q9D0Z3 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tmem53Q9D0Z3 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms