Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf8Q8VC56 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf8Q8VC56 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Rnf8Q8VC56 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Rnf8Q8VC56 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Rnf8Q8VC56 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf8Q8VC56 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Rnf8Q8VC56 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf8Q8VC56 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf8Q8VC56 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf8Q8VC56 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rnf8Q8VC56 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Rnf8Q8VC56 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Rnf8Q8VC56 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Mir449b-201ENSMUST00000104833 80 ntBASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.39□□□□□ -0.27
Rnf8Q8VC56 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Gm18041-201ENSMUST00000218210 618 ntBASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rnf8Q8VC56 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf8Q8VC56 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf8Q8VC56 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf8Q8VC56 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf8Q8VC56 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.38□□□□□ -0.27
Rnf8Q8VC56 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf8Q8VC56 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf8Q8VC56 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Rnf8Q8VC56 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf8Q8VC56 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf8Q8VC56 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf8Q8VC56 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf8Q8VC56 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf8Q8VC56 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.38□□□□□ -0.27
Rnf8Q8VC56 Gm7774-201ENSMUST00000200064 533 ntBASIC13.38□□□□□ -0.27
Rnf8Q8VC56 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf8Q8VC56 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf8Q8VC56 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Rnf8Q8VC56 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf8Q8VC56 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf8Q8VC56 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.38□□□□□ -0.27
Rnf8Q8VC56 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf8Q8VC56 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf8Q8VC56 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf8Q8VC56 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Rnf8Q8VC56 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.38□□□□□ -0.27
Rnf8Q8VC56 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rnf8Q8VC56 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.38□□□□□ -0.27
Rnf8Q8VC56 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.38□□□□□ -0.27
Rnf8Q8VC56 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rnf8Q8VC56 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf8Q8VC56 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf8Q8VC56 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf8Q8VC56 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf8Q8VC56 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf8Q8VC56 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf8Q8VC56 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf8Q8VC56 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf8Q8VC56 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.37□□□□□ -0.27
Rnf8Q8VC56 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf8Q8VC56 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf8Q8VC56 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf8Q8VC56 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf8Q8VC56 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf8Q8VC56 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf8Q8VC56 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf8Q8VC56 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms