Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc87Q8CDL9 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc87Q8CDL9 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc87Q8CDL9 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc87Q8CDL9 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc87Q8CDL9 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc87Q8CDL9 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Ccdc87Q8CDL9 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc87Q8CDL9 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc87Q8CDL9 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.71□□□□□ -0.05
Ccdc87Q8CDL9 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc87Q8CDL9 Gm18737-201ENSMUST00000173594 937 ntBASIC14.71□□□□□ -0.05
Ccdc87Q8CDL9 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.71□□□□□ -0.05
Ccdc87Q8CDL9 Gm27920-201ENSMUST00000183953 96 ntBASIC14.71□□□□□ -0.05
Ccdc87Q8CDL9 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc87Q8CDL9 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc87Q8CDL9 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.71□□□□□ -0.05
Ccdc87Q8CDL9 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Ccdc87Q8CDL9 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc87Q8CDL9 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc87Q8CDL9 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ccdc87Q8CDL9 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ccdc87Q8CDL9 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ccdc87Q8CDL9 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.71□□□□□ -0.06
Ccdc87Q8CDL9 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Ccdc87Q8CDL9 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Ccdc87Q8CDL9 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Ccdc87Q8CDL9 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Ccdc87Q8CDL9 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Ccdc87Q8CDL9 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc87Q8CDL9 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Ccdc87Q8CDL9 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc87Q8CDL9 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc87Q8CDL9 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ccdc87Q8CDL9 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc87Q8CDL9 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc87Q8CDL9 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc87Q8CDL9 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc87Q8CDL9 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc87Q8CDL9 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.7□□□□□ -0.06
Ccdc87Q8CDL9 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc87Q8CDL9 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.7□□□□□ -0.06
Ccdc87Q8CDL9 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc87Q8CDL9 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.7□□□□□ -0.06
Ccdc87Q8CDL9 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.7□□□□□ -0.06
Ccdc87Q8CDL9 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.7□□□□□ -0.06
Ccdc87Q8CDL9 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc87Q8CDL9 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc87Q8CDL9 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.7□□□□□ -0.06
Ccdc87Q8CDL9 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc87Q8CDL9 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc87Q8CDL9 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.7□□□□□ -0.06
Ccdc87Q8CDL9 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.7□□□□□ -0.06
Ccdc87Q8CDL9 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc87Q8CDL9 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
Ccdc87Q8CDL9 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Ccdc87Q8CDL9 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc87Q8CDL9 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc87Q8CDL9 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc87Q8CDL9 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc87Q8CDL9 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Gm2445-201ENSMUST00000182798 989 ntBASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Gm44608-201ENSMUST00000206827 855 ntBASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.69□□□□□ -0.06
Ccdc87Q8CDL9 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms