Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Gm29310-201ENSMUST00000185468 696 ntBASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Gm21825-201ENSMUST00000185728 696 ntBASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Gm29109-201ENSMUST00000185895 696 ntBASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Gm21896-201ENSMUST00000186520 696 ntBASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Gm21873-201ENSMUST00000186728 696 ntBASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Gm21794-201ENSMUST00000187056 696 ntBASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Gm21880-201ENSMUST00000187275 696 ntBASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Gm21826-201ENSMUST00000187451 696 ntBASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Gm21198-201ENSMUST00000188393 696 ntBASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Gm21749-201ENSMUST00000189343 696 ntBASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Gm21901-201ENSMUST00000189568 696 ntBASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Gm29424-201ENSMUST00000189716 696 ntBASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Gm28599-201ENSMUST00000189838 694 ntBASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Gm21867-201ENSMUST00000189917 696 ntBASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Gm29269-201ENSMUST00000190087 696 ntBASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Gm21722-201ENSMUST00000190153 696 ntBASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Gm28423-201ENSMUST00000190701 696 ntBASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Gm21899-201ENSMUST00000190745 696 ntBASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Gm21910-201ENSMUST00000191163 696 ntBASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Gm21849-201ENSMUST00000191571 696 ntBASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Gm28678-201ENSMUST00000191593 696 ntBASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Gm20910-201ENSMUST00000193268 696 ntBASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Gm21871-201ENSMUST00000194621 696 ntBASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.42□□□□□ -0.42
Lysmd4Q8CC84 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lysmd4Q8CC84 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lysmd4Q8CC84 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms