Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps9d1Q8C190 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Vps9d1Q8C190 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps9d1Q8C190 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps9d1Q8C190 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps9d1Q8C190 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Vps9d1Q8C190 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps9d1Q8C190 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps9d1Q8C190 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps9d1Q8C190 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Vps9d1Q8C190 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vps9d1Q8C190 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Gm45612-201ENSMUST00000211320 160 ntBASIC12.98□□□□□ -0.33
Vps9d1Q8C190 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.98□□□□□ -0.33
Vps9d1Q8C190 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vps9d1Q8C190 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Gm12882-201ENSMUST00000121696 517 ntBASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Rpph1-201ENSMUST00000175096 319 ntBASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps9d1Q8C190 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps9d1Q8C190 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps9d1Q8C190 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.96□□□□□ -0.33
Vps9d1Q8C190 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.96□□□□□ -0.33
Vps9d1Q8C190 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps9d1Q8C190 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps9d1Q8C190 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.96□□□□□ -0.33
Vps9d1Q8C190 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps9d1Q8C190 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps9d1Q8C190 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps9d1Q8C190 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vps9d1Q8C190 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps9d1Q8C190 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps9d1Q8C190 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps9d1Q8C190 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms