Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.49■□□□□ 0.07
Trnp1Q80ZI1 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.49■□□□□ 0.07
Trnp1Q80ZI1 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trnp1Q80ZI1 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trnp1Q80ZI1 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.49■□□□□ 0.07
Trnp1Q80ZI1 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trnp1Q80ZI1 Gm18630-201ENSMUST00000222109 1397 ntBASIC15.49■□□□□ 0.07
Trnp1Q80ZI1 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trnp1Q80ZI1 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trnp1Q80ZI1 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trnp1Q80ZI1 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.48■□□□□ 0.07
Trnp1Q80ZI1 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trnp1Q80ZI1 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trnp1Q80ZI1 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trnp1Q80ZI1 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trnp1Q80ZI1 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trnp1Q80ZI1 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC15.48■□□□□ 0.07
Trnp1Q80ZI1 Gm7809-201ENSMUST00000153199 742 ntBASIC15.48■□□□□ 0.07
Trnp1Q80ZI1 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trnp1Q80ZI1 Gm4819-201ENSMUST00000182170 1009 ntBASIC15.48■□□□□ 0.07
Trnp1Q80ZI1 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trnp1Q80ZI1 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC15.48■□□□□ 0.07
Trnp1Q80ZI1 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trnp1Q80ZI1 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trnp1Q80ZI1 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trnp1Q80ZI1 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.48■□□□□ 0.07
Trnp1Q80ZI1 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trnp1Q80ZI1 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trnp1Q80ZI1 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Trnp1Q80ZI1 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.48■□□□□ 0.07
Trnp1Q80ZI1 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trnp1Q80ZI1 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.48■□□□□ 0.07
Trnp1Q80ZI1 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trnp1Q80ZI1 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trnp1Q80ZI1 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trnp1Q80ZI1 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trnp1Q80ZI1 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trnp1Q80ZI1 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trnp1Q80ZI1 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trnp1Q80ZI1 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.47■□□□□ 0.07
Trnp1Q80ZI1 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trnp1Q80ZI1 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trnp1Q80ZI1 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.47■□□□□ 0.07
Trnp1Q80ZI1 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trnp1Q80ZI1 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trnp1Q80ZI1 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trnp1Q80ZI1 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trnp1Q80ZI1 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trnp1Q80ZI1 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trnp1Q80ZI1 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trnp1Q80ZI1 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trnp1Q80ZI1 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trnp1Q80ZI1 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trnp1Q80ZI1 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trnp1Q80ZI1 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trnp1Q80ZI1 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trnp1Q80ZI1 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trnp1Q80ZI1 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trnp1Q80ZI1 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trnp1Q80ZI1 Abhd6-203ENSMUST00000225234 1958 ntBASIC15.47■□□□□ 0.07
Trnp1Q80ZI1 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trnp1Q80ZI1 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Trnp1Q80ZI1 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
Trnp1Q80ZI1 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trnp1Q80ZI1 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trnp1Q80ZI1 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trnp1Q80ZI1 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.47■□□□□ 0.07
Trnp1Q80ZI1 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trnp1Q80ZI1 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Trnp1Q80ZI1 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trnp1Q80ZI1 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trnp1Q80ZI1 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trnp1Q80ZI1 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trnp1Q80ZI1 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trnp1Q80ZI1 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trnp1Q80ZI1 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trnp1Q80ZI1 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trnp1Q80ZI1 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC15.46■□□□□ 0.07
Trnp1Q80ZI1 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC15.46■□□□□ 0.07
Trnp1Q80ZI1 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC15.46■□□□□ 0.07
Trnp1Q80ZI1 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trnp1Q80ZI1 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC15.46■□□□□ 0.07
Trnp1Q80ZI1 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trnp1Q80ZI1 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trnp1Q80ZI1 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trnp1Q80ZI1 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trnp1Q80ZI1 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Trnp1Q80ZI1 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trnp1Q80ZI1 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trnp1Q80ZI1 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trnp1Q80ZI1 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trnp1Q80ZI1 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trnp1Q80ZI1 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trnp1Q80ZI1 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trnp1Q80ZI1 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trnp1Q80ZI1 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trnp1Q80ZI1 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trnp1Q80ZI1 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trnp1Q80ZI1 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.45■□□□□ 0.06
Trnp1Q80ZI1 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms