Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Usp8Q80U87 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Usp8Q80U87 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Usp8Q80U87 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Usp8Q80U87 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Usp8Q80U87 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Usp8Q80U87 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Usp8Q80U87 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Usp8Q80U87 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.92□□□□□ -0.18
Usp8Q80U87 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Usp8Q80U87 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Usp8Q80U87 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Usp8Q80U87 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Usp8Q80U87 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Usp8Q80U87 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Usp8Q80U87 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Usp8Q80U87 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Usp8Q80U87 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Usp8Q80U87 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.92□□□□□ -0.18
Usp8Q80U87 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Usp8Q80U87 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Usp8Q80U87 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Usp8Q80U87 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Usp8Q80U87 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.92□□□□□ -0.18
Usp8Q80U87 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Usp8Q80U87 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Usp8Q80U87 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Usp8Q80U87 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Usp8Q80U87 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Usp8Q80U87 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.92□□□□□ -0.18
Usp8Q80U87 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Usp8Q80U87 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Usp8Q80U87 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Usp8Q80U87 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.92□□□□□ -0.18
Usp8Q80U87 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Usp8Q80U87 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Usp8Q80U87 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Usp8Q80U87 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Usp8Q80U87 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.91□□□□□ -0.18
Usp8Q80U87 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp8Q80U87 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Usp8Q80U87 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp8Q80U87 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.91□□□□□ -0.18
Usp8Q80U87 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Usp8Q80U87 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp8Q80U87 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp8Q80U87 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.91□□□□□ -0.18
Usp8Q80U87 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp8Q80U87 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Usp8Q80U87 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp8Q80U87 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Usp8Q80U87 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp8Q80U87 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.91□□□□□ -0.18
Usp8Q80U87 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.91□□□□□ -0.18
Usp8Q80U87 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Usp8Q80U87 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.91□□□□□ -0.18
Usp8Q80U87 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.91□□□□□ -0.18
Usp8Q80U87 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Usp8Q80U87 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp8Q80U87 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp8Q80U87 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp8Q80U87 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp8Q80U87 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp8Q80U87 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp8Q80U87 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp8Q80U87 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp8Q80U87 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp8Q80U87 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.91□□□□□ -0.18
Usp8Q80U87 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp8Q80U87 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp8Q80U87 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp8Q80U87 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp8Q80U87 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Usp8Q80U87 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Usp8Q80U87 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Usp8Q80U87 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Usp8Q80U87 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.9□□□□□ -0.18
Usp8Q80U87 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Usp8Q80U87 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Usp8Q80U87 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.9□□□□□ -0.18
Usp8Q80U87 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Usp8Q80U87 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Usp8Q80U87 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Usp8Q80U87 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Usp8Q80U87 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Usp8Q80U87 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Usp8Q80U87 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Usp8Q80U87 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Usp8Q80U87 Gm18889-201ENSMUST00000174284 929 ntBASIC13.9□□□□□ -0.18
Usp8Q80U87 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Usp8Q80U87 Gm29310-201ENSMUST00000185468 696 ntBASIC13.9□□□□□ -0.18
Usp8Q80U87 Gm21825-201ENSMUST00000185728 696 ntBASIC13.9□□□□□ -0.18
Usp8Q80U87 Gm29109-201ENSMUST00000185895 696 ntBASIC13.9□□□□□ -0.18
Usp8Q80U87 Gm21896-201ENSMUST00000186520 696 ntBASIC13.9□□□□□ -0.18
Usp8Q80U87 Gm21873-201ENSMUST00000186728 696 ntBASIC13.9□□□□□ -0.18
Usp8Q80U87 Gm21794-201ENSMUST00000187056 696 ntBASIC13.9□□□□□ -0.18
Usp8Q80U87 Gm21880-201ENSMUST00000187275 696 ntBASIC13.9□□□□□ -0.18
Usp8Q80U87 Gm21826-201ENSMUST00000187451 696 ntBASIC13.9□□□□□ -0.18
Usp8Q80U87 Gm21198-201ENSMUST00000188393 696 ntBASIC13.9□□□□□ -0.18
Usp8Q80U87 Gm21749-201ENSMUST00000189343 696 ntBASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms