Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Gm12138-201ENSMUST00000122180 951 ntBASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Gm27701-201ENSMUST00000184498 110 ntBASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdh19Q80TF3 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdh19Q80TF3 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdh19Q80TF3 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.23
Pcdh19Q80TF3 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.58□□□□□ -0.23
Pcdh19Q80TF3 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.58□□□□□ -0.23
Pcdh19Q80TF3 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdh19Q80TF3 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdh19Q80TF3 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 Mir698-201ENSMUST00000102164 109 ntBASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 Gm19891-201ENSMUST00000189771 303 ntBASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh19Q80TF3 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Pcdh19Q80TF3 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.57□□□□□ -0.24
Pcdh19Q80TF3 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh19Q80TF3 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh19Q80TF3 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh19Q80TF3 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Pcdh19Q80TF3 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh19Q80TF3 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pcdh19Q80TF3 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh19Q80TF3 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Pcdh19Q80TF3 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Pcdh19Q80TF3 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pcdh19Q80TF3 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.57□□□□□ -0.24
Pcdh19Q80TF3 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
Pcdh19Q80TF3 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pcdh19Q80TF3 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.57□□□□□ -0.24
Pcdh19Q80TF3 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.57□□□□□ -0.24
Pcdh19Q80TF3 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.57□□□□□ -0.24
Pcdh19Q80TF3 Mir7654-201ENSMUST00000185082 70 ntBASIC13.57□□□□□ -0.24
Pcdh19Q80TF3 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh19Q80TF3 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms