Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.33■□□□□ 0.04
Krt39Q6IFX4 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Krt39Q6IFX4 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.33■□□□□ 0.04
Krt39Q6IFX4 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Krt39Q6IFX4 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Krt39Q6IFX4 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Krt39Q6IFX4 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Krt39Q6IFX4 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Krt39Q6IFX4 Gm37844-201ENSMUST00000192473 4097 ntBASIC15.33■□□□□ 0.04
Krt39Q6IFX4 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.33■□□□□ 0.04
Krt39Q6IFX4 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Krt39Q6IFX4 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Krt39Q6IFX4 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Krt39Q6IFX4 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Krt39Q6IFX4 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Krt39Q6IFX4 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Krt39Q6IFX4 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Krt39Q6IFX4 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Krt39Q6IFX4 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Krt39Q6IFX4 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Krt39Q6IFX4 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Krt39Q6IFX4 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Krt39Q6IFX4 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Krt39Q6IFX4 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.32■□□□□ 0.04
Krt39Q6IFX4 Rprl2-201ENSMUST00000157150 290 ntBASIC15.32■□□□□ 0.04
Krt39Q6IFX4 Gm26308-201ENSMUST00000157768 69 ntBASIC15.32■□□□□ 0.04
Krt39Q6IFX4 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.32■□□□□ 0.04
Krt39Q6IFX4 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.32■□□□□ 0.04
Krt39Q6IFX4 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Krt39Q6IFX4 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krt39Q6IFX4 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.31■□□□□ 0.04
Krt39Q6IFX4 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krt39Q6IFX4 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.31■□□□□ 0.04
Krt39Q6IFX4 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krt39Q6IFX4 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.31■□□□□ 0.04
Krt39Q6IFX4 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC15.31■□□□□ 0.04
Krt39Q6IFX4 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krt39Q6IFX4 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krt39Q6IFX4 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.31■□□□□ 0.04
Krt39Q6IFX4 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krt39Q6IFX4 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Krt39Q6IFX4 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Krt39Q6IFX4 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krt39Q6IFX4 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Krt39Q6IFX4 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krt39Q6IFX4 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Krt39Q6IFX4 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Krt39Q6IFX4 AA543401-201ENSMUST00000164248 1269 ntBASIC15.31■□□□□ 0.04
Krt39Q6IFX4 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.31■□□□□ 0.04
Krt39Q6IFX4 Gm27631-201ENSMUST00000184163 466 ntBASIC15.31■□□□□ 0.04
Krt39Q6IFX4 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Krt39Q6IFX4 AA619741-201ENSMUST00000195095 646 ntBASIC15.31■□□□□ 0.04
Krt39Q6IFX4 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krt39Q6IFX4 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krt39Q6IFX4 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Krt39Q6IFX4 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Krt39Q6IFX4 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krt39Q6IFX4 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krt39Q6IFX4 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krt39Q6IFX4 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Krt39Q6IFX4 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krt39Q6IFX4 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.31■□□□□ 0.04
Krt39Q6IFX4 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Krt39Q6IFX4 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krt39Q6IFX4 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krt39Q6IFX4 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Krt39Q6IFX4 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.31■□□□□ 0.04
Krt39Q6IFX4 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms