Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC16.61■□□□□ 0.25
Vps54Q5SPW0 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Vps54Q5SPW0 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.61■□□□□ 0.25
Vps54Q5SPW0 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps54Q5SPW0 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vps54Q5SPW0 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vps54Q5SPW0 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.61■□□□□ 0.25
Vps54Q5SPW0 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vps54Q5SPW0 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vps54Q5SPW0 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps54Q5SPW0 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps54Q5SPW0 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vps54Q5SPW0 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vps54Q5SPW0 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps54Q5SPW0 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps54Q5SPW0 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Vps54Q5SPW0 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vps54Q5SPW0 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps54Q5SPW0 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vps54Q5SPW0 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vps54Q5SPW0 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps54Q5SPW0 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps54Q5SPW0 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps54Q5SPW0 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vps54Q5SPW0 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.61■□□□□ 0.25
Vps54Q5SPW0 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps54Q5SPW0 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps54Q5SPW0 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Vps54Q5SPW0 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vps54Q5SPW0 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Vps54Q5SPW0 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps54Q5SPW0 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps54Q5SPW0 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC16.6■□□□□ 0.25
Vps54Q5SPW0 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps54Q5SPW0 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps54Q5SPW0 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps54Q5SPW0 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vps54Q5SPW0 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.6■□□□□ 0.25
Vps54Q5SPW0 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vps54Q5SPW0 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.6■□□□□ 0.25
Vps54Q5SPW0 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps54Q5SPW0 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.6■□□□□ 0.25
Vps54Q5SPW0 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vps54Q5SPW0 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.6■□□□□ 0.25
Vps54Q5SPW0 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps54Q5SPW0 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps54Q5SPW0 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Vps54Q5SPW0 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vps54Q5SPW0 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps54Q5SPW0 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps54Q5SPW0 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps54Q5SPW0 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Vps54Q5SPW0 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vps54Q5SPW0 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps54Q5SPW0 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Vps54Q5SPW0 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vps54Q5SPW0 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps54Q5SPW0 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps54Q5SPW0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps54Q5SPW0 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps54Q5SPW0 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps54Q5SPW0 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps54Q5SPW0 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps54Q5SPW0 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps54Q5SPW0 Gm15678-201ENSMUST00000117573 960 ntBASIC16.59■□□□□ 0.25
Vps54Q5SPW0 Gm12138-201ENSMUST00000122180 951 ntBASIC16.59■□□□□ 0.25
Vps54Q5SPW0 Gm12091-201ENSMUST00000146791 830 ntBASIC16.59■□□□□ 0.25
Vps54Q5SPW0 Gm18018-201ENSMUST00000198273 408 ntBASIC16.59■□□□□ 0.25
Vps54Q5SPW0 Gm6745-201ENSMUST00000199216 526 ntBASIC16.59■□□□□ 0.25
Vps54Q5SPW0 Gm19078-201ENSMUST00000206311 727 ntBASIC16.59■□□□□ 0.25
Vps54Q5SPW0 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.59■□□□□ 0.25
Vps54Q5SPW0 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.59■□□□□ 0.25
Vps54Q5SPW0 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps54Q5SPW0 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps54Q5SPW0 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vps54Q5SPW0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Vps54Q5SPW0 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vps54Q5SPW0 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps54Q5SPW0 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps54Q5SPW0 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vps54Q5SPW0 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vps54Q5SPW0 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vps54Q5SPW0 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vps54Q5SPW0 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.58■□□□□ 0.25
Vps54Q5SPW0 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Vps54Q5SPW0 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.58■□□□□ 0.24
Vps54Q5SPW0 Gm14730-201ENSMUST00000122378 1045 ntBASIC16.58■□□□□ 0.24
Vps54Q5SPW0 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.58■□□□□ 0.24
Vps54Q5SPW0 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.58■□□□□ 0.24
Vps54Q5SPW0 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.58■□□□□ 0.24
Vps54Q5SPW0 Gm7498-201ENSMUST00000203282 1084 ntBASIC16.58■□□□□ 0.24
Vps54Q5SPW0 Gm9908-201ENSMUST00000211534 448 ntBASIC16.58■□□□□ 0.24
Vps54Q5SPW0 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.58■□□□□ 0.24
Vps54Q5SPW0 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps54Q5SPW0 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Vps54Q5SPW0 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps54Q5SPW0 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Vps54Q5SPW0 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps54Q5SPW0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vps54Q5SPW0 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms