Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp48Q3V0C5 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp48Q3V0C5 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC17.14■□□□□ 0.33
Usp48Q3V0C5 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Usp48Q3V0C5 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp48Q3V0C5 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp48Q3V0C5 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Usp48Q3V0C5 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Usp48Q3V0C5 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp48Q3V0C5 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp48Q3V0C5 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp48Q3V0C5 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC17.14■□□□□ 0.33
Usp48Q3V0C5 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC17.14■□□□□ 0.33
Usp48Q3V0C5 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp48Q3V0C5 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC17.14■□□□□ 0.33
Usp48Q3V0C5 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC17.14■□□□□ 0.33
Usp48Q3V0C5 Gm27572-201ENSMUST00000183702 255 ntBASIC17.14■□□□□ 0.33
Usp48Q3V0C5 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Usp48Q3V0C5 Gm4959-201ENSMUST00000197271 1044 ntBASIC17.14■□□□□ 0.33
Usp48Q3V0C5 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp48Q3V0C5 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp48Q3V0C5 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp48Q3V0C5 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp48Q3V0C5 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp48Q3V0C5 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp48Q3V0C5 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp48Q3V0C5 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.14■□□□□ 0.33
Usp48Q3V0C5 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp48Q3V0C5 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp48Q3V0C5 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Usp48Q3V0C5 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp48Q3V0C5 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp48Q3V0C5 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.14■□□□□ 0.33
Usp48Q3V0C5 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp48Q3V0C5 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp48Q3V0C5 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp48Q3V0C5 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp48Q3V0C5 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Usp48Q3V0C5 Gm11814-201ENSMUST00000119515 929 ntBASIC17.13■□□□□ 0.33
Usp48Q3V0C5 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp48Q3V0C5 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC17.13■□□□□ 0.33
Usp48Q3V0C5 Gm8652-201ENSMUST00000181363 964 ntBASIC17.13■□□□□ 0.33
Usp48Q3V0C5 Gm27847-201ENSMUST00000183711 107 ntBASIC17.13■□□□□ 0.33
Usp48Q3V0C5 Gm27375-201ENSMUST00000183799 107 ntBASIC17.13■□□□□ 0.33
Usp48Q3V0C5 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC17.13■□□□□ 0.33
Usp48Q3V0C5 Olfr286-202ENSMUST00000205305 969 ntBASIC17.13■□□□□ 0.33
Usp48Q3V0C5 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp48Q3V0C5 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC17.13■□□□□ 0.33
Usp48Q3V0C5 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Usp48Q3V0C5 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Usp48Q3V0C5 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp48Q3V0C5 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp48Q3V0C5 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC17.13■□□□□ 0.33
Usp48Q3V0C5 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp48Q3V0C5 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp48Q3V0C5 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp48Q3V0C5 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp48Q3V0C5 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Usp48Q3V0C5 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp48Q3V0C5 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp48Q3V0C5 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp48Q3V0C5 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp48Q3V0C5 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usp48Q3V0C5 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.12■□□□□ 0.33
Usp48Q3V0C5 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp48Q3V0C5 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp48Q3V0C5 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp48Q3V0C5 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
Usp48Q3V0C5 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp48Q3V0C5 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usp48Q3V0C5 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC17.12■□□□□ 0.33
Usp48Q3V0C5 Gm7172-201ENSMUST00000218047 1152 ntBASIC17.12■□□□□ 0.33
Usp48Q3V0C5 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp48Q3V0C5 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp48Q3V0C5 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Usp48Q3V0C5 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp48Q3V0C5 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usp48Q3V0C5 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp48Q3V0C5 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp48Q3V0C5 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Usp48Q3V0C5 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usp48Q3V0C5 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp48Q3V0C5 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp48Q3V0C5 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Usp48Q3V0C5 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp48Q3V0C5 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp48Q3V0C5 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp48Q3V0C5 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp48Q3V0C5 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp48Q3V0C5 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Usp48Q3V0C5 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp48Q3V0C5 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC17.11■□□□□ 0.33
Usp48Q3V0C5 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Usp48Q3V0C5 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Usp48Q3V0C5 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp48Q3V0C5 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp48Q3V0C5 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Usp48Q3V0C5 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp48Q3V0C5 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp48Q3V0C5 AC155258.1-201ENSMUST00000219303 253 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms