Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn5Q9WU28 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn5Q9WU28 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn5Q9WU28 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Pfdn5Q9WU28 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn5Q9WU28 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn5Q9WU28 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn5Q9WU28 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn5Q9WU28 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Pfdn5Q9WU28 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.4□□□□□ -0.58
Pfdn5Q9WU28 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn5Q9WU28 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn5Q9WU28 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn5Q9WU28 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn5Q9WU28 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn5Q9WU28 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn5Q9WU28 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn5Q9WU28 Gm14859-201ENSMUST00000117752 357 ntBASIC11.4□□□□□ -0.58
Pfdn5Q9WU28 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn5Q9WU28 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC11.4□□□□□ -0.58
Pfdn5Q9WU28 Gm33142-201ENSMUST00000193913 867 ntBASIC11.4□□□□□ -0.58
Pfdn5Q9WU28 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn5Q9WU28 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC11.4□□□□□ -0.58
Pfdn5Q9WU28 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn5Q9WU28 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn5Q9WU28 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn5Q9WU28 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Pfdn5Q9WU28 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn5Q9WU28 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn5Q9WU28 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn5Q9WU28 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn5Q9WU28 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pfdn5Q9WU28 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pfdn5Q9WU28 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pfdn5Q9WU28 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
Pfdn5Q9WU28 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pfdn5Q9WU28 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn5Q9WU28 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn5Q9WU28 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC11.39□□□□□ -0.59
Pfdn5Q9WU28 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Pfdn5Q9WU28 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.39□□□□□ -0.59
Pfdn5Q9WU28 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn5Q9WU28 Gm7222-201ENSMUST00000117512 906 ntBASIC11.39□□□□□ -0.59
Pfdn5Q9WU28 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.39□□□□□ -0.59
Pfdn5Q9WU28 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn5Q9WU28 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.39□□□□□ -0.59
Pfdn5Q9WU28 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.39□□□□□ -0.59
Pfdn5Q9WU28 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn5Q9WU28 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.39□□□□□ -0.59
Pfdn5Q9WU28 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC11.39□□□□□ -0.59
Pfdn5Q9WU28 AC160338.1-201ENSMUST00000214232 705 ntBASIC11.39□□□□□ -0.59
Pfdn5Q9WU28 AC154471.1-201ENSMUST00000224418 436 ntBASIC11.39□□□□□ -0.59
Pfdn5Q9WU28 AC159106.1-201ENSMUST00000224421 690 ntBASIC11.39□□□□□ -0.59
Pfdn5Q9WU28 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn5Q9WU28 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn5Q9WU28 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn5Q9WU28 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn5Q9WU28 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn5Q9WU28 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC11.39□□□□□ -0.59
Pfdn5Q9WU28 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn5Q9WU28 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn5Q9WU28 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn5Q9WU28 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.39□□□□□ -0.59
Pfdn5Q9WU28 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Gm8749-201ENSMUST00000117737 331 ntBASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Gm13836-201ENSMUST00000121159 501 ntBASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn5Q9WU28 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms