Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Gm11025-201ENSMUST00000140773 466 ntBASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Gm25911-201ENSMUST00000157621 56 ntBASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Lima1Q9ERG0 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lima1Q9ERG0 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lima1Q9ERG0 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.71□□□□□ -0.21
Lima1Q9ERG0 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Lima1Q9ERG0 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lima1Q9ERG0 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lima1Q9ERG0 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lima1Q9ERG0 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lima1Q9ERG0 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lima1Q9ERG0 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.71□□□□□ -0.21
Lima1Q9ERG0 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lima1Q9ERG0 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lima1Q9ERG0 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lima1Q9ERG0 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.71□□□□□ -0.21
Lima1Q9ERG0 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.71□□□□□ -0.21
Lima1Q9ERG0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lima1Q9ERG0 Gm27920-201ENSMUST00000183953 96 ntBASIC13.71□□□□□ -0.21
Lima1Q9ERG0 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.71□□□□□ -0.21
Lima1Q9ERG0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lima1Q9ERG0 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lima1Q9ERG0 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Lima1Q9ERG0 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lima1Q9ERG0 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lima1Q9ERG0 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lima1Q9ERG0 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lima1Q9ERG0 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lima1Q9ERG0 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lima1Q9ERG0 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lima1Q9ERG0 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Lima1Q9ERG0 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lima1Q9ERG0 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.71□□□□□ -0.22
Lima1Q9ERG0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
Lima1Q9ERG0 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lima1Q9ERG0 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lima1Q9ERG0 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lima1Q9ERG0 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lima1Q9ERG0 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lima1Q9ERG0 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lima1Q9ERG0 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lima1Q9ERG0 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lima1Q9ERG0 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.7□□□□□ -0.22
Lima1Q9ERG0 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lima1Q9ERG0 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Lima1Q9ERG0 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lima1Q9ERG0 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lima1Q9ERG0 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lima1Q9ERG0 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Lima1Q9ERG0 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Lima1Q9ERG0 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.7□□□□□ -0.22
Lima1Q9ERG0 Gm4995-201ENSMUST00000117247 432 ntBASIC13.7□□□□□ -0.22
Lima1Q9ERG0 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lima1Q9ERG0 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.7□□□□□ -0.22
Lima1Q9ERG0 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Lima1Q9ERG0 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.7□□□□□ -0.22
Lima1Q9ERG0 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms