Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp5Q9D7S9 Gm9924-202ENSMUST00000192760 2311 ntBASIC17.37■□□□□ 0.37
Chmp5Q9D7S9 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp5Q9D7S9 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp5Q9D7S9 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp5Q9D7S9 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp5Q9D7S9 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Chmp5Q9D7S9 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp5Q9D7S9 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Gm25925-201ENSMUST00000158314 306 ntBASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Gm18041-201ENSMUST00000218210 618 ntBASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 BC001981-202ENSMUST00000191393 1545 ntBASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Chmp5Q9D7S9 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Chmp5Q9D7S9 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp5Q9D7S9 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp5Q9D7S9 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp5Q9D7S9 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp5Q9D7S9 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Chmp5Q9D7S9 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC17.35■□□□□ 0.37
Chmp5Q9D7S9 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Chmp5Q9D7S9 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Chmp5Q9D7S9 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.35■□□□□ 0.37
Chmp5Q9D7S9 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp5Q9D7S9 Gm18737-201ENSMUST00000173594 937 ntBASIC17.35■□□□□ 0.37
Chmp5Q9D7S9 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.35■□□□□ 0.37
Chmp5Q9D7S9 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp5Q9D7S9 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp5Q9D7S9 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp5Q9D7S9 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Chmp5Q9D7S9 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp5Q9D7S9 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.35■□□□□ 0.37
Chmp5Q9D7S9 Gm37861-201ENSMUST00000193534 2869 ntBASIC17.35■□□□□ 0.37
Chmp5Q9D7S9 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp5Q9D7S9 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp5Q9D7S9 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp5Q9D7S9 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Chmp5Q9D7S9 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp5Q9D7S9 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp5Q9D7S9 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC17.35■□□□□ 0.37
Chmp5Q9D7S9 Gm2810-201ENSMUST00000118681 990 ntBASIC17.34■□□□□ 0.37
Chmp5Q9D7S9 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.34■□□□□ 0.37
Chmp5Q9D7S9 Gm11025-201ENSMUST00000140773 466 ntBASIC17.34■□□□□ 0.37
Chmp5Q9D7S9 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp5Q9D7S9 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp5Q9D7S9 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC17.34■□□□□ 0.37
Chmp5Q9D7S9 Mir8117-201ENSMUST00000184773 107 ntBASIC17.34■□□□□ 0.37
Chmp5Q9D7S9 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.34■□□□□ 0.37
Chmp5Q9D7S9 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.34■□□□□ 0.37
Chmp5Q9D7S9 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp5Q9D7S9 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp5Q9D7S9 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp5Q9D7S9 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp5Q9D7S9 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC17.34■□□□□ 0.37
Chmp5Q9D7S9 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Chmp5Q9D7S9 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Chmp5Q9D7S9 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp5Q9D7S9 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Chmp5Q9D7S9 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp5Q9D7S9 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chmp5Q9D7S9 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Chmp5Q9D7S9 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Chmp5Q9D7S9 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms