Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Gm10499-201ENSMUST00000174094 934 ntBASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Gm27389-201ENSMUST00000183622 195 ntBASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfdn1Q9CWM4 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pfdn1Q9CWM4 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pfdn1Q9CWM4 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn1Q9CWM4 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.13□□□□□ -0.47
Pfdn1Q9CWM4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn1Q9CWM4 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn1Q9CWM4 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn1Q9CWM4 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn1Q9CWM4 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn1Q9CWM4 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.13□□□□□ -0.47
Pfdn1Q9CWM4 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn1Q9CWM4 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn1Q9CWM4 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn1Q9CWM4 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.13□□□□□ -0.47
Pfdn1Q9CWM4 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn1Q9CWM4 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn1Q9CWM4 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn1Q9CWM4 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn1Q9CWM4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn1Q9CWM4 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.13□□□□□ -0.47
Pfdn1Q9CWM4 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn1Q9CWM4 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.13□□□□□ -0.47
Pfdn1Q9CWM4 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms