Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Krt88Q9CPR6 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Krt88Q9CPR6 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Krt88Q9CPR6 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Krt88Q9CPR6 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Krt88Q9CPR6 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Krt88Q9CPR6 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Krt88Q9CPR6 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Krt88Q9CPR6 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Krt88Q9CPR6 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Krt88Q9CPR6 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Krt88Q9CPR6 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.52□□□□□ -0.41
Krt88Q9CPR6 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Krt88Q9CPR6 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Krt88Q9CPR6 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.52□□□□□ -0.41
Krt88Q9CPR6 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Krt88Q9CPR6 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Krt88Q9CPR6 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
Krt88Q9CPR6 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
Krt88Q9CPR6 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.52□□□□□ -0.41
Krt88Q9CPR6 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Krt88Q9CPR6 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.52□□□□□ -0.41
Krt88Q9CPR6 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Krt88Q9CPR6 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Krt88Q9CPR6 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Krt88Q9CPR6 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Krt88Q9CPR6 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Krt88Q9CPR6 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Krt88Q9CPR6 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Krt88Q9CPR6 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Krt88Q9CPR6 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Krt88Q9CPR6 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.52□□□□□ -0.41
Krt88Q9CPR6 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Krt88Q9CPR6 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Krt88Q9CPR6 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.52□□□□□ -0.41
Krt88Q9CPR6 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Krt88Q9CPR6 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Krt88Q9CPR6 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Krt88Q9CPR6 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Krt88Q9CPR6 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Krt88Q9CPR6 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt88Q9CPR6 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt88Q9CPR6 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt88Q9CPR6 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt88Q9CPR6 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Krt88Q9CPR6 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Krt88Q9CPR6 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Krt88Q9CPR6 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt88Q9CPR6 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt88Q9CPR6 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Krt88Q9CPR6 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Krt88Q9CPR6 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt88Q9CPR6 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt88Q9CPR6 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt88Q9CPR6 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt88Q9CPR6 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.5□□□□□ -0.41
Krt88Q9CPR6 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt88Q9CPR6 Gm2445-201ENSMUST00000182798 989 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms