Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scrt1Q99M85 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scrt1Q99M85 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.18□□□□□ -0.46
Scrt1Q99M85 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Gm15460-201ENSMUST00000118147 391 ntBASIC12.18□□□□□ -0.46
Scrt1Q99M85 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Mir7654-201ENSMUST00000185082 70 ntBASIC12.18□□□□□ -0.46
Scrt1Q99M85 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Scrt1Q99M85 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Scrt1Q99M85 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scrt1Q99M85 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.17□□□□□ -0.46
Scrt1Q99M85 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Scrt1Q99M85 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scrt1Q99M85 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scrt1Q99M85 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scrt1Q99M85 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scrt1Q99M85 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Scrt1Q99M85 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scrt1Q99M85 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Scrt1Q99M85 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scrt1Q99M85 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scrt1Q99M85 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Scrt1Q99M85 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.17□□□□□ -0.46
Scrt1Q99M85 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Scrt1Q99M85 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scrt1Q99M85 Mir1247-201ENSMUST00000116706 82 ntBASIC12.17□□□□□ -0.46
Scrt1Q99M85 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Scrt1Q99M85 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scrt1Q99M85 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.17□□□□□ -0.46
Scrt1Q99M85 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.17□□□□□ -0.46
Scrt1Q99M85 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.17□□□□□ -0.46
Scrt1Q99M85 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.17□□□□□ -0.46
Scrt1Q99M85 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.17□□□□□ -0.46
Scrt1Q99M85 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scrt1Q99M85 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Scrt1Q99M85 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.17□□□□□ -0.46
Scrt1Q99M85 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scrt1Q99M85 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scrt1Q99M85 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scrt1Q99M85 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scrt1Q99M85 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scrt1Q99M85 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Scrt1Q99M85 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Scrt1Q99M85 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scrt1Q99M85 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Scrt1Q99M85 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.17□□□□□ -0.46
Scrt1Q99M85 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scrt1Q99M85 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Scrt1Q99M85 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scrt1Q99M85 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scrt1Q99M85 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scrt1Q99M85 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scrt1Q99M85 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms