Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk5rap3Q99LM2 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.39□□□□□ -0.11
Cdk5rap3Q99LM2 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk5rap3Q99LM2 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cdk5rap3Q99LM2 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.39□□□□□ -0.11
Cdk5rap3Q99LM2 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk5rap3Q99LM2 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk5rap3Q99LM2 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.39□□□□□ -0.11
Cdk5rap3Q99LM2 Gm18889-201ENSMUST00000174284 929 ntBASIC14.39□□□□□ -0.11
Cdk5rap3Q99LM2 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.39□□□□□ -0.11
Cdk5rap3Q99LM2 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.39□□□□□ -0.11
Cdk5rap3Q99LM2 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.39□□□□□ -0.11
Cdk5rap3Q99LM2 Gm27631-201ENSMUST00000184163 466 ntBASIC14.39□□□□□ -0.11
Cdk5rap3Q99LM2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk5rap3Q99LM2 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk5rap3Q99LM2 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cdk5rap3Q99LM2 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk5rap3Q99LM2 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk5rap3Q99LM2 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.39□□□□□ -0.11
Cdk5rap3Q99LM2 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk5rap3Q99LM2 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.39□□□□□ -0.11
Cdk5rap3Q99LM2 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cdk5rap3Q99LM2 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk5rap3Q99LM2 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk5rap3Q99LM2 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cdk5rap3Q99LM2 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 Gm5264-201ENSMUST00000190584 848 ntBASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cdk5rap3Q99LM2 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Gm25911-201ENSMUST00000157621 56 ntBASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Mir125a-201ENSMUST00000083545 68 ntBASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdk5rap3Q99LM2 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdk5rap3Q99LM2 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms