Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc1bQ920F6 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc1bQ920F6 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Smc1bQ920F6 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc1bQ920F6 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Smc1bQ920F6 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc1bQ920F6 Gm5354-201ENSMUST00000182417 973 ntBASIC16.04■□□□□ 0.16
Smc1bQ920F6 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.04■□□□□ 0.16
Smc1bQ920F6 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC16.04■□□□□ 0.16
Smc1bQ920F6 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.04■□□□□ 0.16
Smc1bQ920F6 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smc1bQ920F6 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Smc1bQ920F6 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc1bQ920F6 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc1bQ920F6 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc1bQ920F6 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc1bQ920F6 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.04■□□□□ 0.16
Smc1bQ920F6 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc1bQ920F6 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc1bQ920F6 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc1bQ920F6 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc1bQ920F6 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smc1bQ920F6 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Smc1bQ920F6 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC16.04■□□□□ 0.16
Smc1bQ920F6 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1bQ920F6 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1bQ920F6 Ntrk2-209ENSMUST00000225950 2640 ntBASIC16.03■□□□□ 0.16
Smc1bQ920F6 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1bQ920F6 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Smc1bQ920F6 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1bQ920F6 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1bQ920F6 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Smc1bQ920F6 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1bQ920F6 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1bQ920F6 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.03■□□□□ 0.16
Smc1bQ920F6 Gm12585-201ENSMUST00000117307 290 ntBASIC16.03■□□□□ 0.16
Smc1bQ920F6 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1bQ920F6 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1bQ920F6 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC16.03■□□□□ 0.16
Smc1bQ920F6 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.03■□□□□ 0.16
Smc1bQ920F6 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Smc1bQ920F6 Mir125a-201ENSMUST00000083545 68 ntBASIC16.03■□□□□ 0.16
Smc1bQ920F6 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Smc1bQ920F6 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Smc1bQ920F6 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Smc1bQ920F6 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1bQ920F6 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1bQ920F6 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.03■□□□□ 0.16
Smc1bQ920F6 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1bQ920F6 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1bQ920F6 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Smc1bQ920F6 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1bQ920F6 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1bQ920F6 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc1bQ920F6 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc1bQ920F6 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Smc1bQ920F6 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Smc1bQ920F6 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc1bQ920F6 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc1bQ920F6 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc1bQ920F6 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Smc1bQ920F6 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc1bQ920F6 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc1bQ920F6 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc1bQ920F6 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc1bQ920F6 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Smc1bQ920F6 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.02■□□□□ 0.16
Smc1bQ920F6 Gm12341-201ENSMUST00000119724 503 ntBASIC16.02■□□□□ 0.16
Smc1bQ920F6 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Smc1bQ920F6 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Smc1bQ920F6 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.02■□□□□ 0.16
Smc1bQ920F6 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC16.02■□□□□ 0.16
Smc1bQ920F6 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Smc1bQ920F6 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC16.02■□□□□ 0.16
Smc1bQ920F6 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC16.02■□□□□ 0.16
Smc1bQ920F6 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc1bQ920F6 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.02■□□□□ 0.16
Smc1bQ920F6 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc1bQ920F6 Gm5356-201ENSMUST00000093326 615 ntBASIC16.02■□□□□ 0.16
Smc1bQ920F6 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
Smc1bQ920F6 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC16.02■□□□□ 0.15
Smc1bQ920F6 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smc1bQ920F6 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smc1bQ920F6 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Smc1bQ920F6 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smc1bQ920F6 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smc1bQ920F6 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Smc1bQ920F6 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC16.02■□□□□ 0.15
Smc1bQ920F6 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.02■□□□□ 0.15
Smc1bQ920F6 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc1bQ920F6 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc1bQ920F6 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Smc1bQ920F6 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Smc1bQ920F6 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Smc1bQ920F6 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc1bQ920F6 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.01■□□□□ 0.15
Smc1bQ920F6 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Smc1bQ920F6 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Smc1bQ920F6 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Smc1bQ920F6 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms