Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Cpne3Q8BT60 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Cpne3Q8BT60 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne3Q8BT60 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne3Q8BT60 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne3Q8BT60 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne3Q8BT60 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne3Q8BT60 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne3Q8BT60 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne3Q8BT60 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.43□□□□□ -0.26
Cpne3Q8BT60 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne3Q8BT60 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne3Q8BT60 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne3Q8BT60 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne3Q8BT60 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpne3Q8BT60 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cpne3Q8BT60 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Gm15957-201ENSMUST00000118893 974 ntBASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Gm13823-201ENSMUST00000119930 345 ntBASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Gm18049-201ENSMUST00000208909 581 ntBASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cpne3Q8BT60 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 125.1 ms