Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3b6P59708 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3b6P59708 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3b6P59708 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.33□□□□□ -0.44
Sf3b6P59708 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3b6P59708 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3b6P59708 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3b6P59708 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3b6P59708 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Sf3b6P59708 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3b6P59708 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3b6P59708 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3b6P59708 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3b6P59708 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3b6P59708 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3b6P59708 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.33□□□□□ -0.44
Sf3b6P59708 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3b6P59708 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.33□□□□□ -0.44
Sf3b6P59708 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.33□□□□□ -0.44
Sf3b6P59708 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3b6P59708 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sf3b6P59708 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3b6P59708 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3b6P59708 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Sf3b6P59708 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.32□□□□□ -0.44
Sf3b6P59708 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3b6P59708 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3b6P59708 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3b6P59708 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3b6P59708 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3b6P59708 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3b6P59708 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Sf3b6P59708 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3b6P59708 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.32□□□□□ -0.44
Sf3b6P59708 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3b6P59708 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.32□□□□□ -0.44
Sf3b6P59708 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3b6P59708 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.32□□□□□ -0.44
Sf3b6P59708 Gm9385-201ENSMUST00000117563 472 ntBASIC12.32□□□□□ -0.44
Sf3b6P59708 Gm14494-201ENSMUST00000118786 435 ntBASIC12.32□□□□□ -0.44
Sf3b6P59708 Mir3113-201ENSMUST00000175478 76 ntBASIC12.32□□□□□ -0.44
Sf3b6P59708 Gm27301-201ENSMUST00000184012 127 ntBASIC12.32□□□□□ -0.44
Sf3b6P59708 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.32□□□□□ -0.44
Sf3b6P59708 Thap2-203ENSMUST00000218989 527 ntBASIC12.32□□□□□ -0.44
Sf3b6P59708 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3b6P59708 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3b6P59708 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3b6P59708 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3b6P59708 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3b6P59708 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3b6P59708 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3b6P59708 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3b6P59708 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3b6P59708 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3b6P59708 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3b6P59708 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3b6P59708 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3b6P59708 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sf3b6P59708 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3b6P59708 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3b6P59708 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Sf3b6P59708 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3b6P59708 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sf3b6P59708 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sf3b6P59708 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Sf3b6P59708 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3b6P59708 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sf3b6P59708 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3b6P59708 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3b6P59708 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3b6P59708 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Sf3b6P59708 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3b6P59708 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sf3b6P59708 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3b6P59708 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3b6P59708 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Sf3b6P59708 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3b6P59708 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Sf3b6P59708 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.31□□□□□ -0.44
Sf3b6P59708 Gm17271-201ENSMUST00000165535 355 ntBASIC12.31□□□□□ -0.44
Sf3b6P59708 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3b6P59708 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3b6P59708 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC12.31□□□□□ -0.44
Sf3b6P59708 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3b6P59708 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3b6P59708 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3b6P59708 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3b6P59708 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.31□□□□□ -0.44
Sf3b6P59708 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3b6P59708 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3b6P59708 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3b6P59708 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sf3b6P59708 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3b6P59708 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sf3b6P59708 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Sf3b6P59708 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3b6P59708 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Sf3b6P59708 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sf3b6P59708 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sf3b6P59708 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms