Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
GdnfP48540 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
GdnfP48540 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
GdnfP48540 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
GdnfP48540 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.19□□□□□ -0.46
GdnfP48540 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.19□□□□□ -0.46
GdnfP48540 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
GdnfP48540 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.19□□□□□ -0.46
GdnfP48540 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.18□□□□□ -0.46
GdnfP48540 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.18□□□□□ -0.46
GdnfP48540 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
GdnfP48540 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
GdnfP48540 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.18□□□□□ -0.46
GdnfP48540 CT009738.1-201ENSMUST00000219031 809 ntBASIC12.18□□□□□ -0.46
GdnfP48540 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.18□□□□□ -0.46
GdnfP48540 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.18□□□□□ -0.46
GdnfP48540 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
GdnfP48540 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.18□□□□□ -0.46
GdnfP48540 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.18□□□□□ -0.46
GdnfP48540 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.18□□□□□ -0.46
GdnfP48540 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
GdnfP48540 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
GdnfP48540 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.17□□□□□ -0.46
GdnfP48540 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
GdnfP48540 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
GdnfP48540 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.17□□□□□ -0.46
GdnfP48540 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
GdnfP48540 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
GdnfP48540 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
GdnfP48540 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GdnfP48540 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
GdnfP48540 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GdnfP48540 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
GdnfP48540 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.17□□□□□ -0.46
GdnfP48540 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
GdnfP48540 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
GdnfP48540 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
GdnfP48540 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
GdnfP48540 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.17□□□□□ -0.46
GdnfP48540 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.17□□□□□ -0.46
GdnfP48540 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.17□□□□□ -0.46
GdnfP48540 Gm11025-201ENSMUST00000140773 466 ntBASIC12.17□□□□□ -0.46
GdnfP48540 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.17□□□□□ -0.46
GdnfP48540 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GdnfP48540 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.17□□□□□ -0.46
GdnfP48540 Gm2451-201ENSMUST00000199447 999 ntBASIC12.17□□□□□ -0.46
GdnfP48540 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
GdnfP48540 Gm10290-201ENSMUST00000200451 999 ntBASIC12.17□□□□□ -0.46
GdnfP48540 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
GdnfP48540 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.17□□□□□ -0.46
GdnfP48540 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.17□□□□□ -0.46
GdnfP48540 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.17□□□□□ -0.46
GdnfP48540 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.17□□□□□ -0.46
GdnfP48540 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GdnfP48540 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GdnfP48540 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GdnfP48540 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.17□□□□□ -0.46
GdnfP48540 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
GdnfP48540 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
GdnfP48540 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GdnfP48540 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
GdnfP48540 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GdnfP48540 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
GdnfP48540 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
GdnfP48540 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
GdnfP48540 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
GdnfP48540 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms