Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prox1P48437 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Prox1P48437 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prox1P48437 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Prox1P48437 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prox1P48437 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Prox1P48437 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Prox1P48437 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Prox1P48437 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.35□□□□□ -0.27
Prox1P48437 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.35□□□□□ -0.27
Prox1P48437 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.35□□□□□ -0.27
Prox1P48437 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Prox1P48437 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prox1P48437 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prox1P48437 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.35□□□□□ -0.27
Prox1P48437 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prox1P48437 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prox1P48437 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prox1P48437 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Prox1P48437 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.35□□□□□ -0.27
Prox1P48437 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prox1P48437 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Prox1P48437 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.35□□□□□ -0.27
Prox1P48437 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prox1P48437 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prox1P48437 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prox1P48437 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prox1P48437 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prox1P48437 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prox1P48437 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Prox1P48437 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Prox1P48437 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prox1P48437 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prox1P48437 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prox1P48437 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prox1P48437 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.34□□□□□ -0.27
Prox1P48437 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Prox1P48437 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.34□□□□□ -0.27
Prox1P48437 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prox1P48437 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.34□□□□□ -0.27
Prox1P48437 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Prox1P48437 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prox1P48437 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prox1P48437 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.34□□□□□ -0.27
Prox1P48437 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Prox1P48437 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prox1P48437 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prox1P48437 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Prox1P48437 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.34□□□□□ -0.27
Prox1P48437 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Prox1P48437 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.34□□□□□ -0.27
Prox1P48437 Psmb5-202ENSMUST00000227257 622 ntBASIC13.34□□□□□ -0.27
Prox1P48437 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prox1P48437 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.34□□□□□ -0.27
Prox1P48437 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Prox1P48437 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prox1P48437 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Prox1P48437 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Prox1P48437 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prox1P48437 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prox1P48437 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prox1P48437 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prox1P48437 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Prox1P48437 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
Prox1P48437 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Prox1P48437 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Prox1P48437 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Prox1P48437 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prox1P48437 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Prox1P48437 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prox1P48437 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.33□□□□□ -0.28
Prox1P48437 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Prox1P48437 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.33□□□□□ -0.28
Prox1P48437 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prox1P48437 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prox1P48437 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prox1P48437 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.33□□□□□ -0.28
Prox1P48437 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.33□□□□□ -0.28
Prox1P48437 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Prox1P48437 Gm37230-201ENSMUST00000194491 818 ntBASIC13.33□□□□□ -0.28
Prox1P48437 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prox1P48437 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prox1P48437 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Prox1P48437 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.33□□□□□ -0.28
Prox1P48437 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prox1P48437 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prox1P48437 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Prox1P48437 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Prox1P48437 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prox1P48437 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prox1P48437 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prox1P48437 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prox1P48437 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Prox1P48437 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prox1P48437 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prox1P48437 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Prox1P48437 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prox1P48437 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Prox1P48437 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Prox1P48437 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms