Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cd9P40240 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cd9P40240 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd9P40240 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd9P40240 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.67□□□□□ -0.22
Cd9P40240 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cd9P40240 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Cd9P40240 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd9P40240 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cd9P40240 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd9P40240 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cd9P40240 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
Cd9P40240 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Cd9P40240 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.67□□□□□ -0.22
Cd9P40240 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.67□□□□□ -0.22
Cd9P40240 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.67□□□□□ -0.22
Cd9P40240 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd9P40240 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd9P40240 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd9P40240 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cd9P40240 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd9P40240 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cd9P40240 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.67□□□□□ -0.22
Cd9P40240 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.67□□□□□ -0.22
Cd9P40240 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cd9P40240 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd9P40240 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd9P40240 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd9P40240 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd9P40240 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cd9P40240 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cd9P40240 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd9P40240 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd9P40240 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd9P40240 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.66□□□□□ -0.22
Cd9P40240 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.66□□□□□ -0.22
Cd9P40240 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd9P40240 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd9P40240 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd9P40240 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd9P40240 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd9P40240 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd9P40240 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cd9P40240 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd9P40240 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cd9P40240 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.66□□□□□ -0.22
Cd9P40240 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd9P40240 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd9P40240 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd9P40240 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd9P40240 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.66□□□□□ -0.22
Cd9P40240 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cd9P40240 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.66□□□□□ -0.22
Cd9P40240 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd9P40240 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.66□□□□□ -0.22
Cd9P40240 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd9P40240 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cd9P40240 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd9P40240 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd9P40240 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cd9P40240 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd9P40240 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd9P40240 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd9P40240 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cd9P40240 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Cd9P40240 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Cd9P40240 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd9P40240 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd9P40240 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cd9P40240 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd9P40240 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cd9P40240 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
Cd9P40240 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd9P40240 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd9P40240 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cd9P40240 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.65□□□□□ -0.22
Cd9P40240 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.65□□□□□ -0.22
Cd9P40240 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.65□□□□□ -0.22
Cd9P40240 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cd9P40240 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cd9P40240 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cd9P40240 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cd9P40240 Gm21854-201ENSMUST00000179901 471 ntBASIC13.65□□□□□ -0.22
Cd9P40240 Mir7684-201ENSMUST00000183858 60 ntBASIC13.65□□□□□ -0.22
Cd9P40240 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.65□□□□□ -0.22
Cd9P40240 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.65□□□□□ -0.22
Cd9P40240 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd9P40240 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd9P40240 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Cd9P40240 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Cd9P40240 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd9P40240 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cd9P40240 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.65□□□□□ -0.22
Cd9P40240 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd9P40240 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.65□□□□□ -0.22
Cd9P40240 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd9P40240 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Cd9P40240 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd9P40240 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd9P40240 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms