Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.03□□□□□ -0.32
Nid1P10493 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.03□□□□□ -0.32
Nid1P10493 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.03□□□□□ -0.32
Nid1P10493 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nid1P10493 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.03□□□□□ -0.32
Nid1P10493 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nid1P10493 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Nid1P10493 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.02□□□□□ -0.32
Nid1P10493 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nid1P10493 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nid1P10493 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nid1P10493 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Nid1P10493 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nid1P10493 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nid1P10493 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nid1P10493 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Nid1P10493 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nid1P10493 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nid1P10493 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nid1P10493 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nid1P10493 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nid1P10493 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nid1P10493 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.02□□□□□ -0.33
Nid1P10493 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.02□□□□□ -0.33
Nid1P10493 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Nid1P10493 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nid1P10493 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.02□□□□□ -0.33
Nid1P10493 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Nid1P10493 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Nid1P10493 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nid1P10493 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nid1P10493 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nid1P10493 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nid1P10493 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Nid1P10493 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Nid1P10493 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nid1P10493 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nid1P10493 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nid1P10493 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nid1P10493 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nid1P10493 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nid1P10493 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nid1P10493 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nid1P10493 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Nid1P10493 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nid1P10493 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Nid1P10493 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nid1P10493 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nid1P10493 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Nid1P10493 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nid1P10493 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.01□□□□□ -0.33
Nid1P10493 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nid1P10493 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nid1P10493 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nid1P10493 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nid1P10493 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Nid1P10493 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nid1P10493 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Nid1P10493 Gm25144-201ENSMUST00000179561 110 ntBASIC13.01□□□□□ -0.33
Nid1P10493 Gm25352-201ENSMUST00000179815 110 ntBASIC13.01□□□□□ -0.33
Nid1P10493 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.01□□□□□ -0.33
Nid1P10493 Gm21470-201ENSMUST00000187680 696 ntBASIC13.01□□□□□ -0.33
Nid1P10493 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nid1P10493 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.01□□□□□ -0.33
Nid1P10493 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nid1P10493 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nid1P10493 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Nid1P10493 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nid1P10493 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Nid1P10493 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nid1P10493 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nid1P10493 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nid1P10493 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nid1P10493 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nid1P10493 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nid1P10493 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.01□□□□□ -0.33
Nid1P10493 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nid1P10493 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nid1P10493 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nid1P10493 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Nid1P10493 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nid1P10493 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
Nid1P10493 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nid1P10493 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nid1P10493 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13□□□□□ -0.33
Nid1P10493 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nid1P10493 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nid1P10493 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nid1P10493 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nid1P10493 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Nid1P10493 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nid1P10493 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13□□□□□ -0.33
Nid1P10493 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13□□□□□ -0.33
Nid1P10493 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13□□□□□ -0.33
Nid1P10493 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nid1P10493 Gm9229-201ENSMUST00000222777 126 ntBASIC13□□□□□ -0.33
Nid1P10493 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13□□□□□ -0.33
Nid1P10493 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nid1P10493 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nid1P10493 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms