Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.65□□□□□ -0.22
Hoxa4P06798 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxa4P06798 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Hoxa4P06798 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxa4P06798 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hoxa4P06798 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Hoxa4P06798 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
Hoxa4P06798 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
Hoxa4P06798 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa4P06798 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.64□□□□□ -0.23
Hoxa4P06798 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa4P06798 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa4P06798 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa4P06798 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Hoxa4P06798 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Hoxa4P06798 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa4P06798 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa4P06798 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa4P06798 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa4P06798 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa4P06798 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.64□□□□□ -0.23
Hoxa4P06798 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa4P06798 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa4P06798 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Hoxa4P06798 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Hoxa4P06798 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa4P06798 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Hoxa4P06798 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa4P06798 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa4P06798 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.64□□□□□ -0.23
Hoxa4P06798 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.64□□□□□ -0.23
Hoxa4P06798 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.64□□□□□ -0.23
Hoxa4P06798 Gm26464-201ENSMUST00000157094 305 ntBASIC13.64□□□□□ -0.23
Hoxa4P06798 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.64□□□□□ -0.23
Hoxa4P06798 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.64□□□□□ -0.23
Hoxa4P06798 Gm37917-201ENSMUST00000194711 392 ntBASIC13.64□□□□□ -0.23
Hoxa4P06798 Gm18624-201ENSMUST00000220966 658 ntBASIC13.64□□□□□ -0.23
Hoxa4P06798 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa4P06798 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa4P06798 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa4P06798 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa4P06798 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa4P06798 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa4P06798 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa4P06798 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Hoxa4P06798 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa4P06798 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa4P06798 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa4P06798 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa4P06798 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa4P06798 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hoxa4P06798 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.64□□□□□ -0.23
Hoxa4P06798 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.63□□□□□ -0.23
Hoxa4P06798 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa4P06798 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa4P06798 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa4P06798 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa4P06798 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa4P06798 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa4P06798 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa4P06798 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa4P06798 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa4P06798 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.63□□□□□ -0.23
Hoxa4P06798 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.63□□□□□ -0.23
Hoxa4P06798 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa4P06798 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Hoxa4P06798 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa4P06798 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa4P06798 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa4P06798 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Hoxa4P06798 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa4P06798 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa4P06798 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.63□□□□□ -0.23
Hoxa4P06798 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa4P06798 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Hoxa4P06798 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa4P06798 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa4P06798 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa4P06798 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa4P06798 Gm5161-201ENSMUST00000075243 853 ntBASIC13.63□□□□□ -0.23
Hoxa4P06798 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Hoxa4P06798 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa4P06798 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Hoxa4P06798 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa4P06798 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Hoxa4P06798 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa4P06798 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa4P06798 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa4P06798 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa4P06798 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa4P06798 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Hoxa4P06798 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa4P06798 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Hoxa4P06798 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa4P06798 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hoxa4P06798 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa4P06798 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa4P06798 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa4P06798 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hoxa4P06798 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms