Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF40O75150 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.28■□□□□ 0.52
RNF40O75150 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.28■□□□□ 0.52
RNF40O75150 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
RNF40O75150 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF40O75150 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF40O75150 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF40O75150 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RNF40O75150 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RNF40O75150 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.28■□□□□ 0.52
RNF40O75150 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF40O75150 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF40O75150 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF40O75150 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF40O75150 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF40O75150 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF40O75150 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF40O75150 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF40O75150 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF40O75150 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF40O75150 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF40O75150 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF40O75150 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF40O75150 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RNF40O75150 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF40O75150 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF40O75150 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF40O75150 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF40O75150 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RNF40O75150 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF40O75150 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF40O75150 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF40O75150 KRT18P65-201ENST00000439811 1286 ntBASIC18.27■□□□□ 0.52
RNF40O75150 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF40O75150 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF40O75150 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF40O75150 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF40O75150 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF40O75150 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.27■□□□□ 0.52
RNF40O75150 AC022188.1-201ENST00000620960 1664 ntBASIC18.27■□□□□ 0.52
RNF40O75150 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF40O75150 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF40O75150 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.27■□□□□ 0.51
RNF40O75150 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF40O75150 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.27■□□□□ 0.51
RNF40O75150 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF40O75150 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RNF40O75150 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF40O75150 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF40O75150 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF40O75150 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF40O75150 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF40O75150 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF40O75150 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF40O75150 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RNF40O75150 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF40O75150 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
RNF40O75150 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF40O75150 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF40O75150 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF40O75150 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF40O75150 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF40O75150 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF40O75150 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RNF40O75150 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF40O75150 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF40O75150 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF40O75150 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.26■□□□□ 0.51
RNF40O75150 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF40O75150 AC092183.1-201ENST00000469884 875 ntBASIC18.26■□□□□ 0.51
RNF40O75150 AC092910.1-201ENST00000482027 1129 ntBASIC18.26■□□□□ 0.51
RNF40O75150 OR7E14P-202ENST00000530490 1290 ntBASIC18.26■□□□□ 0.51
RNF40O75150 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.26■□□□□ 0.51
RNF40O75150 AC145285.3-201ENST00000564603 959 ntBASIC18.26■□□□□ 0.51
RNF40O75150 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF40O75150 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF40O75150 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF40O75150 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF40O75150 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RNF40O75150 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RNF40O75150 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF40O75150 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF40O75150 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF40O75150 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF40O75150 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF40O75150 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.25■□□□□ 0.51
RNF40O75150 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF40O75150 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF40O75150 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF40O75150 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF40O75150 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF40O75150 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF40O75150 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF40O75150 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.25■□□□□ 0.51
RNF40O75150 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF40O75150 AC098831.1-202ENST00000438821 336 ntBASIC18.25■□□□□ 0.51
RNF40O75150 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
RNF40O75150 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.25■□□□□ 0.51
RNF40O75150 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF40O75150 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms