Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trove2O08848 Mir8117-201ENSMUST00000184773 107 ntBASIC14.27□□□□□ -0.13
Trove2O08848 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trove2O08848 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.27□□□□□ -0.13
Trove2O08848 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trove2O08848 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trove2O08848 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.27□□□□□ -0.13
Trove2O08848 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trove2O08848 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trove2O08848 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trove2O08848 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trove2O08848 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trove2O08848 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trove2O08848 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trove2O08848 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trove2O08848 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trove2O08848 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trove2O08848 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trove2O08848 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trove2O08848 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.26□□□□□ -0.13
Trove2O08848 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.26□□□□□ -0.13
Trove2O08848 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trove2O08848 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trove2O08848 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Trove2O08848 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.26□□□□□ -0.13
Trove2O08848 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trove2O08848 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trove2O08848 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.26□□□□□ -0.13
Trove2O08848 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trove2O08848 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.26□□□□□ -0.13
Trove2O08848 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trove2O08848 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.26□□□□□ -0.13
Trove2O08848 Gm45747-201ENSMUST00000212203 999 ntBASIC14.26□□□□□ -0.13
Trove2O08848 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trove2O08848 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.26□□□□□ -0.13
Trove2O08848 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trove2O08848 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trove2O08848 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trove2O08848 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trove2O08848 Gm43321-201ENSMUST00000198897 2409 ntBASIC14.26□□□□□ -0.13
Trove2O08848 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trove2O08848 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trove2O08848 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trove2O08848 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trove2O08848 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trove2O08848 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.26□□□□□ -0.13
Trove2O08848 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.26□□□□□ -0.13
Trove2O08848 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trove2O08848 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trove2O08848 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trove2O08848 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trove2O08848 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Trove2O08848 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trove2O08848 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.25□□□□□ -0.13
Trove2O08848 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trove2O08848 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trove2O08848 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trove2O08848 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.25□□□□□ -0.13
Trove2O08848 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trove2O08848 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trove2O08848 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trove2O08848 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trove2O08848 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trove2O08848 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trove2O08848 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.25□□□□□ -0.13
Trove2O08848 Mir3113-201ENSMUST00000175478 76 ntBASIC14.25□□□□□ -0.13
Trove2O08848 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.25□□□□□ -0.13
Trove2O08848 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.25□□□□□ -0.13
Trove2O08848 Gm17968-201ENSMUST00000194902 784 ntBASIC14.25□□□□□ -0.13
Trove2O08848 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trove2O08848 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trove2O08848 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trove2O08848 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trove2O08848 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trove2O08848 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trove2O08848 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trove2O08848 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.25□□□□□ -0.13
Trove2O08848 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.25□□□□□ -0.13
Trove2O08848 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trove2O08848 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Trove2O08848 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trove2O08848 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trove2O08848 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trove2O08848 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trove2O08848 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trove2O08848 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trove2O08848 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.25□□□□□ -0.13
Trove2O08848 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.24□□□□□ -0.13
Trove2O08848 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trove2O08848 Gm4780-202ENSMUST00000215200 2644 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms