Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nop56Q9D6Z1 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nop56Q9D6Z1 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Thap2-203ENSMUST00000218989 527 ntBASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Gm15590-201ENSMUST00000078419 552 ntBASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop56Q9D6Z1 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop56Q9D6Z1 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop56Q9D6Z1 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop56Q9D6Z1 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nop56Q9D6Z1 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop56Q9D6Z1 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop56Q9D6Z1 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop56Q9D6Z1 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop56Q9D6Z1 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop56Q9D6Z1 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop56Q9D6Z1 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Nop56Q9D6Z1 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.36□□□□□ -0.11
Nop56Q9D6Z1 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nop56Q9D6Z1 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop56Q9D6Z1 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nop56Q9D6Z1 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nop56Q9D6Z1 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.36□□□□□ -0.11
Nop56Q9D6Z1 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop56Q9D6Z1 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop56Q9D6Z1 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop56Q9D6Z1 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nop56Q9D6Z1 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nop56Q9D6Z1 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nop56Q9D6Z1 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop56Q9D6Z1 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop56Q9D6Z1 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop56Q9D6Z1 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nop56Q9D6Z1 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop56Q9D6Z1 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nop56Q9D6Z1 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nop56Q9D6Z1 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nop56Q9D6Z1 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop56Q9D6Z1 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nop56Q9D6Z1 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop56Q9D6Z1 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop56Q9D6Z1 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nop56Q9D6Z1 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop56Q9D6Z1 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop56Q9D6Z1 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop56Q9D6Z1 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nop56Q9D6Z1 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nop56Q9D6Z1 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nop56Q9D6Z1 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop56Q9D6Z1 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nop56Q9D6Z1 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop56Q9D6Z1 Gm10275-202ENSMUST00000168697 495 ntBASIC14.35□□□□□ -0.11
Nop56Q9D6Z1 Gm17971-201ENSMUST00000190239 806 ntBASIC14.35□□□□□ -0.11
Nop56Q9D6Z1 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop56Q9D6Z1 Gm10275-201ENSMUST00000092620 635 ntBASIC14.35□□□□□ -0.11
Nop56Q9D6Z1 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop56Q9D6Z1 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.35□□□□□ -0.11
Nop56Q9D6Z1 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Nop56Q9D6Z1 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nop56Q9D6Z1 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nop56Q9D6Z1 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nop56Q9D6Z1 Rubie-203ENSMUST00000227803 2430 ntBASIC14.35□□□□□ -0.11
Nop56Q9D6Z1 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.35□□□□□ -0.11
Nop56Q9D6Z1 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nop56Q9D6Z1 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nop56Q9D6Z1 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms