Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lysmd1Q9D0E3 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC14.68□□□□□ -0.06
Lysmd1Q9D0E3 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.68□□□□□ -0.06
Lysmd1Q9D0E3 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lysmd1Q9D0E3 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Lysmd1Q9D0E3 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lysmd1Q9D0E3 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lysmd1Q9D0E3 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lysmd1Q9D0E3 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Gm9358-201ENSMUST00000183067 927 ntBASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Gm37905-201ENSMUST00000195310 341 ntBASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Gm4768-201ENSMUST00000206199 686 ntBASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Gm5950-201ENSMUST00000213337 772 ntBASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Gm3318-201ENSMUST00000217604 1183 ntBASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lysmd1Q9D0E3 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Gm26185-201ENSMUST00000157692 266 ntBASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Gm18734-201ENSMUST00000172937 808 ntBASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Gm8492-201ENSMUST00000182375 987 ntBASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Gm19287-201ENSMUST00000203190 358 ntBASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 AC166992.1-201ENSMUST00000216356 565 ntBASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Lysmd1Q9D0E3 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lysmd1Q9D0E3 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lysmd1Q9D0E3 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lysmd1Q9D0E3 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Lysmd1Q9D0E3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lysmd1Q9D0E3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Lysmd1Q9D0E3 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lysmd1Q9D0E3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lysmd1Q9D0E3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.65□□□□□ -0.06
Lysmd1Q9D0E3 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lysmd1Q9D0E3 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms