Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Gm15957-201ENSMUST00000118893 974 ntBASIC13.72□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.72□□□□□ -0.21
Nipsnap3bQ9CQE1 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.72□□□□□ -0.21
Nipsnap3bQ9CQE1 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.72□□□□□ -0.21
Nipsnap3bQ9CQE1 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Nipsnap3bQ9CQE1 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Nipsnap3bQ9CQE1 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.72□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.72□□□□□ -0.21
Nipsnap3bQ9CQE1 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nipsnap3bQ9CQE1 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Nipsnap3bQ9CQE1 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nipsnap3bQ9CQE1 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Nipsnap3bQ9CQE1 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nipsnap3bQ9CQE1 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nipsnap3bQ9CQE1 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.72□□□□□ -0.21
Nipsnap3bQ9CQE1 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nipsnap3bQ9CQE1 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Nipsnap3bQ9CQE1 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.71□□□□□ -0.21
Nipsnap3bQ9CQE1 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Nipsnap3bQ9CQE1 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.71□□□□□ -0.21
Nipsnap3bQ9CQE1 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nipsnap3bQ9CQE1 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nipsnap3bQ9CQE1 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Nipsnap3bQ9CQE1 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nipsnap3bQ9CQE1 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Nipsnap3bQ9CQE1 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nipsnap3bQ9CQE1 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nipsnap3bQ9CQE1 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nipsnap3bQ9CQE1 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.71□□□□□ -0.21
Nipsnap3bQ9CQE1 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.71□□□□□ -0.21
Nipsnap3bQ9CQE1 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nipsnap3bQ9CQE1 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.71□□□□□ -0.21
Nipsnap3bQ9CQE1 Rprl2-201ENSMUST00000157150 290 ntBASIC13.71□□□□□ -0.21
Nipsnap3bQ9CQE1 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.71□□□□□ -0.21
Nipsnap3bQ9CQE1 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nipsnap3bQ9CQE1 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nipsnap3bQ9CQE1 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nipsnap3bQ9CQE1 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Nipsnap3bQ9CQE1 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nipsnap3bQ9CQE1 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nipsnap3bQ9CQE1 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nipsnap3bQ9CQE1 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Nipsnap3bQ9CQE1 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Nipsnap3bQ9CQE1 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nipsnap3bQ9CQE1 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nipsnap3bQ9CQE1 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nipsnap3bQ9CQE1 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nipsnap3bQ9CQE1 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nipsnap3bQ9CQE1 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nipsnap3bQ9CQE1 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nipsnap3bQ9CQE1 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nipsnap3bQ9CQE1 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nipsnap3bQ9CQE1 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nipsnap3bQ9CQE1 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm13823-201ENSMUST00000119930 345 ntBASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm6222-201ENSMUST00000120787 396 ntBASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nipsnap3bQ9CQE1 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms