Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ska1Q9CPV1 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ska1Q9CPV1 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Ska1Q9CPV1 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Ska1Q9CPV1 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Rpph1-201ENSMUST00000175096 319 ntBASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.14□□□□□ -0.31
Ska1Q9CPV1 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ska1Q9CPV1 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Gm18041-201ENSMUST00000218210 618 ntBASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ska1Q9CPV1 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ska1Q9CPV1 Gm15467-201ENSMUST00000120582 445 ntBASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms