Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf111Q99ML9 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf111Q99ML9 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf111Q99ML9 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rnf111Q99ML9 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.51□□□□□ -0.25
Rnf111Q99ML9 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf111Q99ML9 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf111Q99ML9 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Rnf111Q99ML9 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf111Q99ML9 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf111Q99ML9 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf111Q99ML9 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf111Q99ML9 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Rnf111Q99ML9 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.5□□□□□ -0.25
Rnf111Q99ML9 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf111Q99ML9 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf111Q99ML9 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf111Q99ML9 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
Rnf111Q99ML9 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Rnf111Q99ML9 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf111Q99ML9 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf111Q99ML9 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.5□□□□□ -0.25
Rnf111Q99ML9 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.5□□□□□ -0.25
Rnf111Q99ML9 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf111Q99ML9 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Rnf111Q99ML9 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf111Q99ML9 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.5□□□□□ -0.25
Rnf111Q99ML9 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.5□□□□□ -0.25
Rnf111Q99ML9 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf111Q99ML9 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf111Q99ML9 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Rnf111Q99ML9 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf111Q99ML9 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf111Q99ML9 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf111Q99ML9 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf111Q99ML9 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf111Q99ML9 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rnf111Q99ML9 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf111Q99ML9 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf111Q99ML9 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf111Q99ML9 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf111Q99ML9 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf111Q99ML9 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Rnf111Q99ML9 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf111Q99ML9 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf111Q99ML9 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Rnf111Q99ML9 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.49□□□□□ -0.25
Rnf111Q99ML9 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Rnf111Q99ML9 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf111Q99ML9 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf111Q99ML9 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf111Q99ML9 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Rnf111Q99ML9 Gm23935-201ENSMUST00000102303 57 ntBASIC13.49□□□□□ -0.25
Rnf111Q99ML9 Gm24270-201ENSMUST00000102326 57 ntBASIC13.49□□□□□ -0.25
Rnf111Q99ML9 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Rnf111Q99ML9 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf111Q99ML9 Gm24245-201ENSMUST00000157318 57 ntBASIC13.49□□□□□ -0.25
Rnf111Q99ML9 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf111Q99ML9 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf111Q99ML9 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf111Q99ML9 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf111Q99ML9 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Rnf111Q99ML9 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.49□□□□□ -0.25
Rnf111Q99ML9 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf111Q99ML9 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.49□□□□□ -0.25
Rnf111Q99ML9 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf111Q99ML9 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf111Q99ML9 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
Rnf111Q99ML9 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Rnf111Q99ML9 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rnf111Q99ML9 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf111Q99ML9 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf111Q99ML9 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Rnf111Q99ML9 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf111Q99ML9 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf111Q99ML9 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf111Q99ML9 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Rnf111Q99ML9 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Rnf111Q99ML9 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf111Q99ML9 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.48□□□□□ -0.25
Rnf111Q99ML9 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf111Q99ML9 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Rnf111Q99ML9 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf111Q99ML9 Gm25287-201ENSMUST00000103846 110 ntBASIC13.48□□□□□ -0.25
Rnf111Q99ML9 Gm22918-201ENSMUST00000103855 110 ntBASIC13.48□□□□□ -0.25
Rnf111Q99ML9 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf111Q99ML9 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.48□□□□□ -0.25
Rnf111Q99ML9 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf111Q99ML9 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Rnf111Q99ML9 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf111Q99ML9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf111Q99ML9 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf111Q99ML9 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.48□□□□□ -0.25
Rnf111Q99ML9 AC154532.1-201ENSMUST00000227860 965 ntBASIC13.48□□□□□ -0.25
Rnf111Q99ML9 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf111Q99ML9 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf111Q99ML9 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf111Q99ML9 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf111Q99ML9 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rnf111Q99ML9 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms