Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Pcdhb3Q91XZ7 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb3Q91XZ7 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.98□□□□□ -0.17
Pcdhb3Q91XZ7 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb3Q91XZ7 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb3Q91XZ7 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.98□□□□□ -0.17
Pcdhb3Q91XZ7 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb3Q91XZ7 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb3Q91XZ7 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb3Q91XZ7 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb3Q91XZ7 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb3Q91XZ7 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb3Q91XZ7 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb3Q91XZ7 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Pcdhb3Q91XZ7 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb3Q91XZ7 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Pcdhb3Q91XZ7 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.98□□□□□ -0.17
Pcdhb3Q91XZ7 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb3Q91XZ7 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb3Q91XZ7 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb3Q91XZ7 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb3Q91XZ7 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Pcdhb3Q91XZ7 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb3Q91XZ7 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb3Q91XZ7 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb3Q91XZ7 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb3Q91XZ7 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb3Q91XZ7 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Pcdhb3Q91XZ7 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.97□□□□□ -0.17
Pcdhb3Q91XZ7 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb3Q91XZ7 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC13.97□□□□□ -0.17
Pcdhb3Q91XZ7 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb3Q91XZ7 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.97□□□□□ -0.17
Pcdhb3Q91XZ7 Gm19080-201ENSMUST00000196082 550 ntBASIC13.97□□□□□ -0.17
Pcdhb3Q91XZ7 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC13.97□□□□□ -0.17
Pcdhb3Q91XZ7 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb3Q91XZ7 CT009754.4-201ENSMUST00000221430 565 ntBASIC13.97□□□□□ -0.17
Pcdhb3Q91XZ7 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb3Q91XZ7 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb3Q91XZ7 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb3Q91XZ7 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.97□□□□□ -0.17
Pcdhb3Q91XZ7 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb3Q91XZ7 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Pcdhb3Q91XZ7 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Pcdhb3Q91XZ7 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb3Q91XZ7 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb3Q91XZ7 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb3Q91XZ7 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb3Q91XZ7 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb3Q91XZ7 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb3Q91XZ7 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb3Q91XZ7 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb3Q91XZ7 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.96□□□□□ -0.17
Pcdhb3Q91XZ7 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb3Q91XZ7 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.96□□□□□ -0.17
Pcdhb3Q91XZ7 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.96□□□□□ -0.17
Pcdhb3Q91XZ7 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
Pcdhb3Q91XZ7 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb3Q91XZ7 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.96□□□□□ -0.17
Pcdhb3Q91XZ7 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb3Q91XZ7 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb3Q91XZ7 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb3Q91XZ7 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Pcdhb3Q91XZ7 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb3Q91XZ7 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Pcdhb3Q91XZ7 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb3Q91XZ7 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb3Q91XZ7 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Pcdhb3Q91XZ7 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb3Q91XZ7 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb3Q91XZ7 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb3Q91XZ7 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb3Q91XZ7 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.96□□□□□ -0.18
Pcdhb3Q91XZ7 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb3Q91XZ7 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb3Q91XZ7 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb3Q91XZ7 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb3Q91XZ7 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb3Q91XZ7 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb3Q91XZ7 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb3Q91XZ7 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb3Q91XZ7 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms