Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.85□□□□□ -0.19
Pcdhb4Q91XZ6 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb4Q91XZ6 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdhb4Q91XZ6 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb4Q91XZ6 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdhb4Q91XZ6 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Pcdhb4Q91XZ6 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.85□□□□□ -0.19
Pcdhb4Q91XZ6 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb4Q91XZ6 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb4Q91XZ6 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb4Q91XZ6 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb4Q91XZ6 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb4Q91XZ6 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb4Q91XZ6 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb4Q91XZ6 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb4Q91XZ6 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb4Q91XZ6 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.85□□□□□ -0.19
Pcdhb4Q91XZ6 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb4Q91XZ6 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.85□□□□□ -0.19
Pcdhb4Q91XZ6 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb4Q91XZ6 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb4Q91XZ6 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdhb4Q91XZ6 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb4Q91XZ6 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Pcdhb4Q91XZ6 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhb4Q91XZ6 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Gm11594-201ENSMUST00000122313 162 ntBASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhb4Q91XZ6 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdhb4Q91XZ6 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdhb4Q91XZ6 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
Pcdhb4Q91XZ6 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdhb4Q91XZ6 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdhb4Q91XZ6 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb4Q91XZ6 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb4Q91XZ6 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb4Q91XZ6 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb4Q91XZ6 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb4Q91XZ6 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Pcdhb4Q91XZ6 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb4Q91XZ6 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb4Q91XZ6 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb4Q91XZ6 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb4Q91XZ6 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb4Q91XZ6 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.83□□□□□ -0.2
Pcdhb4Q91XZ6 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.83□□□□□ -0.2
Pcdhb4Q91XZ6 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.83□□□□□ -0.2
Pcdhb4Q91XZ6 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.83□□□□□ -0.2
Pcdhb4Q91XZ6 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb4Q91XZ6 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.83□□□□□ -0.2
Pcdhb4Q91XZ6 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Pcdhb4Q91XZ6 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.83□□□□□ -0.2
Pcdhb4Q91XZ6 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.83□□□□□ -0.2
Pcdhb4Q91XZ6 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb4Q91XZ6 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb4Q91XZ6 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb4Q91XZ6 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb4Q91XZ6 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb4Q91XZ6 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.83□□□□□ -0.2
Pcdhb4Q91XZ6 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb4Q91XZ6 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Pcdhb4Q91XZ6 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb4Q91XZ6 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.83□□□□□ -0.2
Pcdhb4Q91XZ6 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb4Q91XZ6 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Pcdhb4Q91XZ6 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms