Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rpap2Q8VC34 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Gm15487-201ENSMUST00000122373 465 ntBASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Gm27838-201ENSMUST00000184829 128 ntBASIC15.26■□□□□ 0.03
Rpap2Q8VC34 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.26■□□□□ 0.03
Rpap2Q8VC34 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.25■□□□□ 0.03
Rpap2Q8VC34 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Gm24420-201ENSMUST00000176676 59 ntBASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Rpap2Q8VC34 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpap2Q8VC34 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpap2Q8VC34 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Rpap2Q8VC34 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpap2Q8VC34 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Rpap2Q8VC34 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpap2Q8VC34 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpap2Q8VC34 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rpap2Q8VC34 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.24■□□□□ 0.03
Rpap2Q8VC34 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.24■□□□□ 0.03
Rpap2Q8VC34 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rpap2Q8VC34 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpap2Q8VC34 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.24■□□□□ 0.03
Rpap2Q8VC34 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.24■□□□□ 0.03
Rpap2Q8VC34 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpap2Q8VC34 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rpap2Q8VC34 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rpap2Q8VC34 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rpap2Q8VC34 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpap2Q8VC34 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Rpap2Q8VC34 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rpap2Q8VC34 Gm20949-201ENSMUST00000206478 952 ntBASIC15.24■□□□□ 0.03
Rpap2Q8VC34 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Rpap2Q8VC34 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rpap2Q8VC34 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpap2Q8VC34 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpap2Q8VC34 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpap2Q8VC34 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpap2Q8VC34 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rpap2Q8VC34 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rpap2Q8VC34 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms