Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim9Q8C7M3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim9Q8C7M3 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim9Q8C7M3 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim9Q8C7M3 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim9Q8C7M3 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim9Q8C7M3 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.34■□□□□ 0.05
Trim9Q8C7M3 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim9Q8C7M3 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim9Q8C7M3 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim9Q8C7M3 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim9Q8C7M3 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim9Q8C7M3 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trim9Q8C7M3 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim9Q8C7M3 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim9Q8C7M3 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Trim9Q8C7M3 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
Trim9Q8C7M3 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trim9Q8C7M3 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim9Q8C7M3 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim9Q8C7M3 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim9Q8C7M3 Gm4804-201ENSMUST00000182234 999 ntBASIC15.34■□□□□ 0.05
Trim9Q8C7M3 Gm27306-201ENSMUST00000183970 107 ntBASIC15.34■□□□□ 0.05
Trim9Q8C7M3 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC15.34■□□□□ 0.05
Trim9Q8C7M3 AC166997.1-201ENSMUST00000225122 572 ntBASIC15.34■□□□□ 0.05
Trim9Q8C7M3 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trim9Q8C7M3 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trim9Q8C7M3 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Trim9Q8C7M3 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim9Q8C7M3 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim9Q8C7M3 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.34■□□□□ 0.05
Trim9Q8C7M3 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.34■□□□□ 0.05
Trim9Q8C7M3 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim9Q8C7M3 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim9Q8C7M3 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim9Q8C7M3 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trim9Q8C7M3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trim9Q8C7M3 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim9Q8C7M3 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim9Q8C7M3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Trim9Q8C7M3 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim9Q8C7M3 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.33■□□□□ 0.05
Trim9Q8C7M3 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trim9Q8C7M3 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim9Q8C7M3 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim9Q8C7M3 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim9Q8C7M3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim9Q8C7M3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim9Q8C7M3 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim9Q8C7M3 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim9Q8C7M3 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim9Q8C7M3 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trim9Q8C7M3 Gm4875-201ENSMUST00000118257 786 ntBASIC15.33■□□□□ 0.04
Trim9Q8C7M3 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.33■□□□□ 0.04
Trim9Q8C7M3 Gm13385-201ENSMUST00000121089 220 ntBASIC15.33■□□□□ 0.04
Trim9Q8C7M3 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim9Q8C7M3 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim9Q8C7M3 Gm8927-201ENSMUST00000181978 981 ntBASIC15.33■□□□□ 0.04
Trim9Q8C7M3 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Trim9Q8C7M3 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim9Q8C7M3 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC15.33■□□□□ 0.04
Trim9Q8C7M3 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim9Q8C7M3 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim9Q8C7M3 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim9Q8C7M3 Gm3222-201ENSMUST00000071282 990 ntBASIC15.33■□□□□ 0.04
Trim9Q8C7M3 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Trim9Q8C7M3 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim9Q8C7M3 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim9Q8C7M3 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim9Q8C7M3 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim9Q8C7M3 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim9Q8C7M3 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim9Q8C7M3 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim9Q8C7M3 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim9Q8C7M3 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trim9Q8C7M3 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim9Q8C7M3 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim9Q8C7M3 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.33■□□□□ 0.04
Trim9Q8C7M3 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim9Q8C7M3 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms