Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ptcd1Q8C2E4 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ptcd1Q8C2E4 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ptcd1Q8C2E4 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ptcd1Q8C2E4 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.09■□□□□ 0.33
Ptcd1Q8C2E4 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ptcd1Q8C2E4 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ptcd1Q8C2E4 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ptcd1Q8C2E4 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ptcd1Q8C2E4 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ptcd1Q8C2E4 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ptcd1Q8C2E4 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ptcd1Q8C2E4 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ptcd1Q8C2E4 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ptcd1Q8C2E4 Gm12416-201ENSMUST00000120911 1008 ntBASIC17.09■□□□□ 0.33
Ptcd1Q8C2E4 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC17.09■□□□□ 0.33
Ptcd1Q8C2E4 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC17.09■□□□□ 0.33
Ptcd1Q8C2E4 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC17.09■□□□□ 0.33
Ptcd1Q8C2E4 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC17.09■□□□□ 0.33
Ptcd1Q8C2E4 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC17.09■□□□□ 0.33
Ptcd1Q8C2E4 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ptcd1Q8C2E4 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC17.09■□□□□ 0.33
Ptcd1Q8C2E4 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ptcd1Q8C2E4 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ptcd1Q8C2E4 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ptcd1Q8C2E4 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ptcd1Q8C2E4 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ptcd1Q8C2E4 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ptcd1Q8C2E4 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ptcd1Q8C2E4 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ptcd1Q8C2E4 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ptcd1Q8C2E4 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ptcd1Q8C2E4 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Ptcd1Q8C2E4 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ptcd1Q8C2E4 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ptcd1Q8C2E4 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ptcd1Q8C2E4 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ptcd1Q8C2E4 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ptcd1Q8C2E4 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ptcd1Q8C2E4 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ptcd1Q8C2E4 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ptcd1Q8C2E4 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ptcd1Q8C2E4 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ptcd1Q8C2E4 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ptcd1Q8C2E4 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ptcd1Q8C2E4 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ptcd1Q8C2E4 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ptcd1Q8C2E4 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC17.08■□□□□ 0.32
Ptcd1Q8C2E4 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC17.08■□□□□ 0.32
Ptcd1Q8C2E4 Gm27243-201ENSMUST00000183964 521 ntBASIC17.08■□□□□ 0.32
Ptcd1Q8C2E4 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC17.08■□□□□ 0.32
Ptcd1Q8C2E4 Gm43818-201ENSMUST00000200605 466 ntBASIC17.08■□□□□ 0.32
Ptcd1Q8C2E4 AC073947.1-201ENSMUST00000216991 649 ntBASIC17.08■□□□□ 0.32
Ptcd1Q8C2E4 CU024892.2-201ENSMUST00000224608 832 ntBASIC17.08■□□□□ 0.32
Ptcd1Q8C2E4 AC154276.1-201ENSMUST00000228874 1299 ntBASIC17.08■□□□□ 0.32
Ptcd1Q8C2E4 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ptcd1Q8C2E4 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ptcd1Q8C2E4 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ptcd1Q8C2E4 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ptcd1Q8C2E4 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ptcd1Q8C2E4 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ptcd1Q8C2E4 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ptcd1Q8C2E4 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ptcd1Q8C2E4 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ptcd1Q8C2E4 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ptcd1Q8C2E4 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ptcd1Q8C2E4 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ptcd1Q8C2E4 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ptcd1Q8C2E4 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ptcd1Q8C2E4 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ptcd1Q8C2E4 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ptcd1Q8C2E4 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ptcd1Q8C2E4 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ptcd1Q8C2E4 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ptcd1Q8C2E4 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ptcd1Q8C2E4 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ptcd1Q8C2E4 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ptcd1Q8C2E4 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ptcd1Q8C2E4 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ptcd1Q8C2E4 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ptcd1Q8C2E4 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ptcd1Q8C2E4 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ptcd1Q8C2E4 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Ptcd1Q8C2E4 Gm13050-201ENSMUST00000122149 1345 ntBASIC17.07■□□□□ 0.32
Ptcd1Q8C2E4 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC17.07■□□□□ 0.32
Ptcd1Q8C2E4 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ptcd1Q8C2E4 Gm18054-201ENSMUST00000207539 555 ntBASIC17.07■□□□□ 0.32
Ptcd1Q8C2E4 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ptcd1Q8C2E4 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC17.07■□□□□ 0.32
Ptcd1Q8C2E4 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ptcd1Q8C2E4 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ptcd1Q8C2E4 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ptcd1Q8C2E4 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ptcd1Q8C2E4 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ptcd1Q8C2E4 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ptcd1Q8C2E4 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ptcd1Q8C2E4 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.07■□□□□ 0.32
Ptcd1Q8C2E4 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ptcd1Q8C2E4 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ptcd1Q8C2E4 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms