Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Rnf38Q8BI21 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf38Q8BI21 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Rnf38Q8BI21 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf38Q8BI21 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf38Q8BI21 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf38Q8BI21 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf38Q8BI21 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf38Q8BI21 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf38Q8BI21 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf38Q8BI21 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Rnf38Q8BI21 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf38Q8BI21 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.44□□□□□ -0.26
Rnf38Q8BI21 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Rnf38Q8BI21 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Rnf38Q8BI21 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf38Q8BI21 Gm15957-201ENSMUST00000118893 974 ntBASIC13.44□□□□□ -0.26
Rnf38Q8BI21 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.44□□□□□ -0.26
Rnf38Q8BI21 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf38Q8BI21 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf38Q8BI21 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Rnf38Q8BI21 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf38Q8BI21 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf38Q8BI21 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf38Q8BI21 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf38Q8BI21 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf38Q8BI21 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf38Q8BI21 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf38Q8BI21 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf38Q8BI21 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf38Q8BI21 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf38Q8BI21 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf38Q8BI21 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf38Q8BI21 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rnf38Q8BI21 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Gm2810-201ENSMUST00000118681 990 ntBASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Gm24513-201ENSMUST00000174964 138 ntBASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Gm27397-201ENSMUST00000184997 107 ntBASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Gm18057-201ENSMUST00000208220 503 ntBASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.43□□□□□ -0.26
Rnf38Q8BI21 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms