Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.79□□□□□ -0.04
Trim6Q8BGE7 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.79□□□□□ -0.04
Trim6Q8BGE7 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim6Q8BGE7 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trim6Q8BGE7 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim6Q8BGE7 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim6Q8BGE7 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim6Q8BGE7 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim6Q8BGE7 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.79□□□□□ -0.04
Trim6Q8BGE7 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim6Q8BGE7 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim6Q8BGE7 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim6Q8BGE7 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.78□□□□□ -0.04
Trim6Q8BGE7 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim6Q8BGE7 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim6Q8BGE7 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim6Q8BGE7 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim6Q8BGE7 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim6Q8BGE7 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim6Q8BGE7 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.78□□□□□ -0.04
Trim6Q8BGE7 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim6Q8BGE7 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim6Q8BGE7 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim6Q8BGE7 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim6Q8BGE7 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim6Q8BGE7 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim6Q8BGE7 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim6Q8BGE7 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim6Q8BGE7 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim6Q8BGE7 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trim6Q8BGE7 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.78□□□□□ -0.04
Trim6Q8BGE7 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.78□□□□□ -0.04
Trim6Q8BGE7 Gm14140-201ENSMUST00000119999 995 ntBASIC14.78□□□□□ -0.04
Trim6Q8BGE7 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim6Q8BGE7 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.78□□□□□ -0.04
Trim6Q8BGE7 Gm27920-201ENSMUST00000183953 96 ntBASIC14.78□□□□□ -0.04
Trim6Q8BGE7 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.78□□□□□ -0.04
Trim6Q8BGE7 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim6Q8BGE7 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim6Q8BGE7 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim6Q8BGE7 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim6Q8BGE7 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim6Q8BGE7 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim6Q8BGE7 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim6Q8BGE7 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim6Q8BGE7 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim6Q8BGE7 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim6Q8BGE7 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim6Q8BGE7 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim6Q8BGE7 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim6Q8BGE7 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim6Q8BGE7 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trim6Q8BGE7 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim6Q8BGE7 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim6Q8BGE7 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim6Q8BGE7 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim6Q8BGE7 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim6Q8BGE7 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.77□□□□□ -0.05
Trim6Q8BGE7 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Trim6Q8BGE7 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim6Q8BGE7 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.77□□□□□ -0.05
Trim6Q8BGE7 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.77□□□□□ -0.05
Trim6Q8BGE7 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.77□□□□□ -0.05
Trim6Q8BGE7 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.77□□□□□ -0.05
Trim6Q8BGE7 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim6Q8BGE7 Gm7461-201ENSMUST00000058918 827 ntBASIC14.77□□□□□ -0.05
Trim6Q8BGE7 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim6Q8BGE7 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Trim6Q8BGE7 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trim6Q8BGE7 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim6Q8BGE7 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim6Q8BGE7 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim6Q8BGE7 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim6Q8BGE7 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Trim6Q8BGE7 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim6Q8BGE7 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trim6Q8BGE7 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim6Q8BGE7 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim6Q8BGE7 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trim6Q8BGE7 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trim6Q8BGE7 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim6Q8BGE7 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim6Q8BGE7 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.76□□□□□ -0.05
Trim6Q8BGE7 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim6Q8BGE7 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim6Q8BGE7 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim6Q8BGE7 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.76□□□□□ -0.05
Trim6Q8BGE7 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim6Q8BGE7 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim6Q8BGE7 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim6Q8BGE7 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trim6Q8BGE7 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim6Q8BGE7 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trim6Q8BGE7 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trim6Q8BGE7 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim6Q8BGE7 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim6Q8BGE7 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.76□□□□□ -0.05
Trim6Q8BGE7 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Trim6Q8BGE7 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.76□□□□□ -0.05
Trim6Q8BGE7 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms