Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpm1P58771 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Tpm1P58771 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpm1P58771 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpm1P58771 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpm1P58771 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tpm1P58771 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.53■□□□□ 0.08
Tpm1P58771 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Tpm1P58771 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tpm1P58771 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Tpm1P58771 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tpm1P58771 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tpm1P58771 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tpm1P58771 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tpm1P58771 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
Tpm1P58771 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tpm1P58771 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.52■□□□□ 0.08
Tpm1P58771 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tpm1P58771 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tpm1P58771 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tpm1P58771 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Tpm1P58771 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tpm1P58771 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.52■□□□□ 0.08
Tpm1P58771 Gm27628-201ENSMUST00000184911 107 ntBASIC15.52■□□□□ 0.08
Tpm1P58771 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.52■□□□□ 0.08
Tpm1P58771 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tpm1P58771 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tpm1P58771 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tpm1P58771 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Tpm1P58771 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tpm1P58771 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tpm1P58771 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tpm1P58771 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Tpm1P58771 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tpm1P58771 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tpm1P58771 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Tpm1P58771 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tpm1P58771 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Tpm1P58771 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tpm1P58771 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tpm1P58771 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tpm1P58771 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tpm1P58771 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tpm1P58771 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.51■□□□□ 0.07
Tpm1P58771 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tpm1P58771 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tpm1P58771 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Tpm1P58771 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tpm1P58771 AC164107.1-201ENSMUST00000227730 2161 ntBASIC15.51■□□□□ 0.07
Tpm1P58771 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tpm1P58771 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Tpm1P58771 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
Tpm1P58771 Gm13597-201ENSMUST00000121239 375 ntBASIC15.51■□□□□ 0.07
Tpm1P58771 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tpm1P58771 Gm27301-201ENSMUST00000184012 127 ntBASIC15.51■□□□□ 0.07
Tpm1P58771 AC154595.3-201ENSMUST00000224579 384 ntBASIC15.51■□□□□ 0.07
Tpm1P58771 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tpm1P58771 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Tpm1P58771 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tpm1P58771 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tpm1P58771 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.51■□□□□ 0.07
Tpm1P58771 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tpm1P58771 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Tpm1P58771 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Tpm1P58771 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC15.51■□□□□ 0.07
Tpm1P58771 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tpm1P58771 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tpm1P58771 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tpm1P58771 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tpm1P58771 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tpm1P58771 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tpm1P58771 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Tpm1P58771 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpm1P58771 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tpm1P58771 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpm1P58771 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpm1P58771 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpm1P58771 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpm1P58771 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpm1P58771 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tpm1P58771 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tpm1P58771 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tpm1P58771 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Tpm1P58771 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Tpm1P58771 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Tpm1P58771 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Tpm1P58771 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Tpm1P58771 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpm1P58771 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tpm1P58771 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpm1P58771 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tpm1P58771 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpm1P58771 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpm1P58771 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpm1P58771 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tpm1P58771 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tpm1P58771 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC15.5■□□□□ 0.07
Tpm1P58771 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tpm1P58771 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC15.5■□□□□ 0.07
Tpm1P58771 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms